RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 GNEQ9Y223 722 aaKnown RBP15.5■□□□□ 0.07
SS18-201ENST00000269137 IGKV6-21A0A0C4DH24 114 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 SFPQP23246 707 aaKnown RBP eCLIP15.49■□□□□ 0.07
SS18-201ENST00000269137 CYP2C19P33261 490 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 TBC1D8BQ0IIM8 1120 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 ARID5BQ14865 1188 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 PRAMEF19Q5SWL8 479 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 TMEM143Q96AN5 459 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 MKNK1Q9BUB5 465 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 NDST4Q9H3R1 872 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 METTL14Q9HCE5 456 aaKnown RBP15.49■□□□□ 0.07
SS18-201ENST00000269137 ARHGAP28Q9P2N2 729 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 FAM184BQ9ULE4 1060 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 TBX20Q9UMR3 447 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 EXOC7Q9UPT5 735 aa15.49■□□□□ 0.07
SS18-201ENST00000269137 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.49■□□□□ 0.072e-6■■□□□ 14.5
SS18-201ENST00000269137 ADCY6O43306 1168 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 MMP3P08254 477 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 MAP2K2P36507 400 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 NAMPTP43490 491 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 ZNF484Q5JVG2 852 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 IER5Q5VY09 327 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 MAP4K3Q8IVH8 894 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 ERGIC2Q96RQ1 377 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 C16orf70Q9BSU1 422 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 TRPC6Q9Y210 931 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 Q9Y3F1 56 aa15.48■□□□□ 0.07
SS18-201ENST00000269137 DENND3A2RUS2 1198 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 A6NJR5 290 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 PES1O00541 588 aaKnown RBP15.47■□□□□ 0.07
SS18-201ENST00000269137 CLIC2O15247 247 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 AKAP3O75969 853 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 EPB41P11171 864 aaKnown RBP15.47■□□□□ 0.07
SS18-201ENST00000269137 GLRA2P23416 452 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 PPP2R3AQ06190 1150 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 LRMPQ12912 555 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 TRIM14Q14142 442 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 DGKDQ16760 1214 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 FKBP15Q5T1M5 1219 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 PPFIBP1Q86W92 1011 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 ASAP3Q8TDY4 903 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 TCP11Q8WWU5 503 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 ARHGAP39Q9C0H5 1083 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 IKZF4Q9H2S9 585 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 RNPEPQ9H4A4 650 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 ARMCX3Q9UH62 379 aaPredicted RBP15.47■□□□□ 0.07
SS18-201ENST00000269137 ZNF215Q9UL58 517 aaPredicted RBP15.47■□□□□ 0.07
SS18-201ENST00000269137 ADGRA3Q8IWK6 1321 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 PSMC2P35998 433 aaKnown RBP15.47■□□□□ 0.07
SS18-201ENST00000269137 SP3Q02447 781 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 BORCS6Q96GS4 357 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 KIFC3Q9BVG8 833 aa15.47■□□□□ 0.07
SS18-201ENST00000269137 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.47■□□□□ 0.07
SS18-201ENST00000269137 COL1A2P08123 1366 aa15.46■□□□□ 0.07
SS18-201ENST00000269137 H3BRB1 525 aa15.46■□□□□ 0.07
SS18-201ENST00000269137 DYNC1LI2O43237 492 aaPredicted RBP15.46■□□□□ 0.07
SS18-201ENST00000269137 MSNP26038 577 aaKnown RBP15.46■□□□□ 0.07
SS18-201ENST00000269137 CASP4P49662 377 aa15.46■□□□□ 0.07
SS18-201ENST00000269137 CEP135Q66GS9 1140 aa15.46■□□□□ 0.07
SS18-201ENST00000269137 TC2NQ8N9U0 490 aa15.46■□□□□ 0.07
SS18-201ENST00000269137 TUT1Q9H6E5 874 aaKnown RBP15.46■□□□□ 0.07
SS18-201ENST00000269137 MAGEB2O15479 319 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 TBC1D8O95759 1140 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 GYPCP04921 128 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 ZNF286BP0CG31 522 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 INSRRP14616 1297 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 FLT3LGP49771 235 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 CCZ1BP86790 482 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 CCZ1P86791 482 aaPredicted RBP15.45■□□□□ 0.06
SS18-201ENST00000269137 RBL2Q08999 1139 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
SS18-201ENST00000269137 MXD4Q14582 209 aaPredicted RBP15.45■□□□□ 0.06
SS18-201ENST00000269137 KIF22Q14807 665 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 SYCP1Q15431 976 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 BRDTQ58F21 947 aaPredicted RBP15.45■□□□□ 0.06
SS18-201ENST00000269137 RETREG2Q8NC44 543 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 CCDC112Q8NEF3 446 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 IQCDQ96DY2 449 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 NUP58Q9BVL2 599 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 TMX1Q9H3N1 280 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 GABRQQ9UN88 632 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 FRMD4BQ9Y2L6 1034 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 CASP8AP2Q9UKL3 1982 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 AKR1B15C9JRZ8 316 aaPredicted RBP15.45■□□□□ 0.06
SS18-201ENST00000269137 NRDCO43847 1150 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 TPM1P09493 284 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 CNGA1P29973 690 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 DRP2Q13474 957 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 FIGNQ5HY92 759 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 MFSD14CQ5VZR4 134 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 TAS1R3Q7RTX0 852 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 TLK2Q86UE8 772 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 FAM186BQ8IYM0 893 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 DEPTORQ8TB45 409 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 PRPF31Q8WWY3 499 aaKnown RBP15.45■□□□□ 0.06
SS18-201ENST00000269137 PSPC1Q8WXF1 523 aaKnown RBP15.45■□□□□ 0.06
SS18-201ENST00000269137 CCDC51Q96ER9 411 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 TMEM134Q9H6X4 195 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 RNF186Q9NXI6 227 aa15.45■□□□□ 0.06
SS18-201ENST00000269137 SIK3Q9Y2K2 1263 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms