RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 HEMGNQ9BXL5 484 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 TRIM39Q9HCM9 518 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 HSPBP1Q9NZL4 362 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 RIMS2Q9UQ26 1411 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 FGD2Q7Z6J4 655 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 HIC1Q14526 733 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 CRYMQ14894 314 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 TRIM69Q86WT6 500 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 ZNF710Q8N1W2 664 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 NARS2Q96I59 477 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 ACCSQ96QU6 501 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 PLIN5Q00G26 463 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 MED21Q13503 144 aa11.86□□□□□ -0.51
CHFR-201ENST00000266880 MTHFSDQ2M296 383 aaKnown RBP11.86□□□□□ -0.51
CHFR-201ENST00000266880 CCDC78A2IDD5 438 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 TJP3O95049 919 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 PASD1Q8IV76 773 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 EME1Q96AY2 570 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 SPDYE5A6NIY4 337 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 SPDYE7PQ495Y7 208 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 TBC1D22AQ8WUA7 517 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 C19orf44Q9H6X5 657 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 STRNO43815 780 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 KBTBD12Q3ZCT8 623 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 ZBTB33Q86T24 672 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 LRRIQ3A6PVS8 624 aaPredicted RBP11.85□□□□□ -0.51
CHFR-201ENST00000266880 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
CHFR-201ENST00000266880 KLHL38Q2WGJ6 581 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 PLA2G4DQ86XP0 818 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 MEIS1O00470 390 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 FGFR4P22455 802 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 SYNGAP1Q96PV0 1343 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 PRXQ9BXM0 1461 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 IGF2BP3O00425 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHFR-201ENST00000266880 NEMP1O14524 444 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 PRPF4O43172 522 aaKnown RBP eCLIP11.85□□□□□ -0.516e-6■■■■□ 20.1
CHFR-201ENST00000266880 NR5A1Q13285 461 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 PWP1Q13610 501 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 DDHD1Q8NEL9 900 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 AFF4Q9UHB7 1163 aaKnown RBP11.85□□□□□ -0.51
CHFR-201ENST00000266880 C16orf96A6NNT2 1141 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 ANGPT2O15123 496 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 ZAP70P43403 619 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 SCG3Q8WXD2 468 aaKnown RBP11.85□□□□□ -0.51
CHFR-201ENST00000266880 MARCOQ9UEW3 520 aaPredicted RBP11.85□□□□□ -0.51
CHFR-201ENST00000266880 MYBL1P10243 752 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 TMEM110Q86TL2 294 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 GATAD2AQ86YP4 633 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 NUP85Q9BW27 656 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 CD248Q9HCU0 757 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 ATP8B3O60423 1300 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.85□□□□□ -0.51
CHFR-201ENST00000266880 DGKIO75912 1065 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
CHFR-201ENST00000266880 TRIP10Q15642 601 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 FAM162AQ96A26 154 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 FSD1LQ9BXM9 530 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 GGA1Q9UJY5 639 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 AKT3Q9Y243 479 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 ACEP12821 1306 aa11.85□□□□□ -0.51
CHFR-201ENST00000266880 CLEC4FQ8N1N0 589 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 LMCD1Q9NZU5 365 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 SOS2Q07890 1332 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 C17orf80Q9BSJ5 609 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 TRABDQ9H4I3 376 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 MED23Q9ULK4 1368 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 CCDC189A1A4V9 331 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 ARPP19P56211 112 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 C7orf31Q8N865 590 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 ST13P5Q8NFI4 369 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 SPRTNQ9H040 489 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 SSH2Q76I76 1423 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 C5orf58C9J3I9 102 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 PAX7P23759 505 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 NAA30Q147X3 362 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 ZNF658Q5TYW1 1059 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 LARP4BQ92615 738 aaKnown RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 CCSER2Q9H7U1 834 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 TRIM74Q86UV6 250 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 TRIM73Q86UV7 250 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 METTL23Q86XA0 190 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 SFR1Q86XK3 245 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 TEKT3Q9BXF9 490 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 FAM96AQ9H5X1 160 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 SPATA2Q9UM82 520 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 GAP43P17677 238 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 ZBED6P86452 979 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 DSCC1Q9BVC3 393 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 IL1RL2Q9HB29 575 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 MCM8Q9UJA3 840 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 EDC3Q96F86 508 aaKnown RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 BATF3Q9NR55 127 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 BLOC1S6Q9UL45 172 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms