RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 NIPA1Q7RTP0 329 aa6.36□□□□□ -1.39
SEMA3A-201ENST00000265362 CDKL2Q92772 493 aa6.36□□□□□ -1.39
SEMA3A-201ENST00000265362 USTQ9Y2C2 406 aa6.36□□□□□ -1.39
SEMA3A-201ENST00000265362 LAMB1P07942 1786 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 PALMO75781 387 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 STX2P32856 288 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 IRX4P78413 519 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 PKN1Q16512 942 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 CRY2Q49AN0 593 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 SNRNP48Q6IEG0 339 aaKnown RBP6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 SPATA4Q8NEY3 305 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 MKL1Q969V6 931 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 MSTO1Q9BUK6 570 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 TRIM62Q9BVG3 475 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ROBO3Q96MS0 1386 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 GAKO14976 1311 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 MICAL3Q7RTP6 2002 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 A6NJR5 290 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 RTN2O75298 545 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ICAM1P05362 532 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 HOXC6P09630 235 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 IL9RQ01113 521 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ARID5BQ14865 1188 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 PDXDC1Q6P996 788 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ARMCX2Q7L311 632 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 EFCAB13Q8IY85 973 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 MOCS3O95396 460 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 CHGBP05060 677 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 STAT3P40763 770 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 FMO5P49326 533 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 STK4Q13043 487 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 CTTNQ14247 550 aaKnown RBP6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 NAB2Q15742 525 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 TRIM50Q86XT4 487 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 COG1Q8WTW3 980 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 DNAJC7Q99615 494 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 IFNB1P01574 187 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 TGFB2P61812 414 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 TTI2Q6NXR4 508 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ZNF662Q6ZS27 426 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 SEPT14Q6ZU15 432 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 MIGA2Q7L4E1 593 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 HAUS6Q7Z4H7 955 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ANKRD13CQ8N6S4 541 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 TUBB6Q9BUF5 446 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 AP5M1Q9H0R1 490 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ST7Q9NRC1 585 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 FAM217BQ9NTX9 383 aaPredicted RBP6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 TMX2Q9Y320 296 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 MAGEB2O15479 319 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 RFC5P40937 340 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 DRAP1Q14919 205 aaPredicted RBP6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 DHX38Q92620 1227 aaKnown RBP6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 BTAF1O14981 1849 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 PLS3P13797 630 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 UCHL3P15374 230 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 CHST13Q8NET6 341 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 RPS6KC1Q96S38 1066 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 MXRA8Q9BRK3 442 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 KCNQ5Q9NR82 932 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 A0A1B0GUL6 1792 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ATP8B3O60423 1300 aa6.35□□□□□ -1.39
SEMA3A-201ENST00000265362 ASAP2O43150 1006 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 ZC3H11AO75152 810 aaKnown RBP eCLIP6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 SLC25A27O95847 323 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 TFAMQ00059 246 aaKnown RBP6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 COBLL1Q53SF7 1204 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 MAP3K21Q5TCX8 1036 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 PPP4R1Q8TF05 950 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 GPR101Q96P66 508 aaPredicted RBP6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 MMS19Q96T76 1030 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 ZNF302Q9NR11 478 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 INTS9Q9NV88 658 aaKnown RBP6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 TMEM260Q9NX78 707 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 SENP1Q9P0U3 644 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 POLLQ9UGP5 575 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 AKT3Q9Y243 479 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 DENND3A2RUS2 1198 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 SMIM23A6NLE4 172 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 E9PMD0 336 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 CAPN9O14815 690 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 PFDN6O15212 129 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 FCER1AP12319 257 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 CACNB3P54284 484 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 SPP2Q13103 211 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 TERF2Q15554 542 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 ANKRD20A3Q5VUR7 823 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 USP49Q70CQ1 688 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 STMN2Q93045 179 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 ASB14A6NK59 587 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 MYCNP04198 464 aaPredicted RBP6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 ZNF667Q5HYK9 610 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 WDR93Q6P2C0 686 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 ZNF710Q8N1W2 664 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 GPD1LQ8N335 351 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 DYDC2Q96IM9 177 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 RSRC1Q96IZ7 334 aaKnown RBP6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 CYP26B1Q9NR63 512 aa6.34□□□□□ -1.39
SEMA3A-201ENST00000265362 DDX56Q9NY93 547 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms