RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 H2AFY2Q9P0M6 372 aaPredicted RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 DDX25Q9UHL0 483 aaKnown RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 USP15Q9Y4E8 981 aaPredicted RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 H0Y3Z8 333 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 NFIBO00712 420 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 DNAJC6O75061 913 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 CLASP2O75122 1294 aaKnown RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 RAD51Q06609 339 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 CC2D2BQ6DHV5 1058 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 ALKBH5Q6P6C2 394 aaKnown RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 ARHGAP27Q6ZUM4 889 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 ZNF579Q8NAF0 562 aaKnown RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 TMEM35BQ8NCS4 154 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 MCRS1Q96EZ8 462 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 FAM227BQ96M60 508 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 XPO6Q96QU8 1125 aaKnown RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.79□□□□□ -1.482e-6■■□□□ 13.2
XRN1-201ENST00000264951 OSBPL5Q9H0X9 879 aaPredicted RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 VPS33BQ9H267 617 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 DISC1Q9NRI5 854 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 ITM2BQ9Y287 266 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 C5orf58C9J3I9 102 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 BRAFP15056 766 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 CYP2C19P33261 490 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 SLC1A1P43005 524 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 FNTAP49354 379 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 EPHB1P54762 984 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 TRIP4Q15650 581 aaPredicted RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 TIMM50Q3ZCQ8 353 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 PCNX4Q63HM2 1172 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 SDE2Q6IQ49 451 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 ANGPTL8Q6UXH0 198 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 DYMQ7RTS9 669 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 AGBL1Q96MI9 1066 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 CCT7Q99832 543 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 CTNNAL1Q9UBT7 734 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 PTPN22Q9Y2R2 807 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 TRIM13O60858 407 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 TGFBR2P37173 567 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 STX5Q13190 355 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 ATAD3BQ5T9A4 648 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 PPP4R4Q6NUP7 873 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 LRRC31Q6UY01 552 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 KCTD17Q8N5Z5 321 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 ABCB6Q9NP58 842 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 NMRK1Q9NWW6 199 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 RCOR1Q9UKL0 485 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 USP19O94966 1318 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 PDE8AO60658 829 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 COBLO75128 1261 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 FGGP02679 453 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 POLD1P28340 1107 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 POLGP54098 1239 aaPredicted RBP5.79□□□□□ -1.48
XRN1-201ENST00000264951 CCNA1P78396 465 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 CALML6Q8TD86 181 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 AMNQ9BXJ7 453 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 ADNPQ9H2P0 1102 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 MTMR6Q9Y217 621 aa5.79□□□□□ -1.48
XRN1-201ENST00000264951 H3BMM5 538 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 SYNCRIPO60506 623 aaKnown RBP5.78□□□□□ -1.48
XRN1-201ENST00000264951 ECDO95905 644 aaPredicted RBP5.78□□□□□ -1.48
XRN1-201ENST00000264951 MECOMQ03112 1051 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 C1DQ13901 141 aaKnown RBP5.78□□□□□ -1.48
XRN1-201ENST00000264951 XKR9Q5GH70 373 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 DENND6AQ8IWF6 608 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 ENKURQ8TC29 256 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 RNF139Q8WU17 664 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 VPS33AQ96AX1 596 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 OLA1Q9NTK5 396 aaKnown RBP5.78□□□□□ -1.48
XRN1-201ENST00000264951 AP3M1Q9Y2T2 418 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 RTCBQ9Y3I0 505 aaKnown RBP5.78□□□□□ -1.48
XRN1-201ENST00000264951 PCDHA13Q9Y5I0 950 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 STX11O75558 287 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 BTNL9Q6UXG8 535 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 GPR141Q7Z602 305 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 HPS3Q969F9 1004 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 GPR108Q9NPR9 543 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 SH3GLB2Q9NR46 395 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 KLHL20Q9Y2M5 609 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 MTSS1O43312 755 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 MFAP3LO75121 409 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 GUCA1CO95843 209 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 TSHZ3Q63HK5 1081 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 NLRP9Q7RTR0 991 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 NME9Q86XW9 330 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 ZBTB38Q8NAP3 1195 aaPredicted RBP5.78□□□□□ -1.48
XRN1-201ENST00000264951 BEST2Q8NFU1 509 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 GCNAQ96QF7 691 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 RIC8BQ9NVN3 520 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 TMEM51Q9NW97 253 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 PCDHB8Q9UN66 801 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 UBN2Q6ZU65 1347 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 CFAP99D6REC4 459 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 AKAP5P24588 427 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 LONRF3Q496Y0 759 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 CCDC36Q8IYA8 594 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 APPL2Q8NEU8 664 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 PHACTR3Q96KR7 559 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 FSD1LQ9BXM9 530 aa5.78□□□□□ -1.48
XRN1-201ENST00000264951 CARD9Q9H257 536 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms