RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 VPS37BQ9H9H4 285 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 PPP1R11O60927 126 aaPredicted RBP17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 CALCAP01258 141 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 FGRP09769 529 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 SOX5P35711 763 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 GIT2Q14161 759 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 KIRREL3Q8IZU9 778 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 KLHL11Q9NVR0 708 aa17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 TTC7AQ9ULT0 858 aaPredicted RBP17.46■□□□□ 0.39
PDZRN3-201ENST00000263666 LOC102724159A0A0B4J2E5 919 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 TMEM150BA6NC51 233 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 PWP2Q15269 919 aaKnown RBP17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 MEI1Q5TIA1 1274 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 CYFIP2Q96F07 1278 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 LXNQ9BS40 222 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 KIFC3Q9BVG8 833 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 TULP2O00295 520 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 HNRNPDLO14979 420 aaKnown RBP17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 MSH4O15457 936 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 FLT3P36888 993 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 RHBDL3P58872 404 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 CCDC63Q8NA47 563 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 SLC20A1Q8WUM9 679 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 MYO5AQ9Y4I1 1855 aaKnown RBP17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 FAM86B1E9PN63 330 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 CCDC188H7C350 402 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 FAM86B2P0C5J1 330 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 NACC1Q96RE7 527 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 CCDC77Q9BR77 488 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 WDR91A4D1P6 747 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 FOXN3O00409 490 aaPredicted RBP17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 FMO5P49326 533 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 SMTNP53814 917 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 ZNF394Q53GI3 561 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 PPP1R18Q6NYC8 613 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 PADI6Q6TGC4 694 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 C18orf8Q96DM3 657 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 ANKFY1Q9P2R3 1169 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 PPP1R9AQ9ULJ8 1098 aa17.45■□□□□ 0.38
PDZRN3-201ENST00000263666 PDE6CP51160 858 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 PMS2P54278 862 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 SNCBQ16143 134 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 EDEM3Q9BZQ6 932 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 EML1O00423 815 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 HIP1RO75146 1068 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 ZBTB16Q05516 673 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 LONRF1Q17RB8 773 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 CCDC137Q6PK04 289 aaKnown RBP17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 FRMD5Q7Z6J6 570 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 MYCNP04198 464 aaPredicted RBP17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 MAPK4P31152 587 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 CDK17Q00537 523 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 SLC29A2Q14542 456 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 PPP4R3AQ6IN85 833 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 INTS8Q75QN2 995 aaKnown RBP17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 CCDC13Q8IYE1 715 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 FBXO25Q8TCJ0 367 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 RFFLQ8WZ73 363 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 ZNF668Q96K58 619 aaPredicted RBP17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 STMN4Q9H169 189 aaPredicted RBP17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 TAS2R14Q9NYV8 317 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 USP20Q9Y2K6 914 aa17.44■□□□□ 0.38
PDZRN3-201ENST00000263666 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 PDXKO00764 312 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 CAND2O75155 1236 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 CHN1P15882 459 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 DYNLT1P63172 113 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 HGSNATQ68CP4 663 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 ACER1Q8TDN7 264 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 UBXN6Q9BZV1 441 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 ANAPC7Q9UJX3 599 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 SERPINA10Q9UK55 444 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 ALG6Q9Y672 507 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 SHMT1P34896 483 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 WDR44Q5JSH3 913 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 TRIM68Q6AZZ1 485 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 HVCN1Q96D96 273 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 ISCUQ9H1K1 167 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 GPRC5CQ9NQ84 441 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 GAP43P17677 238 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 ERFP50548 548 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 TAOK1Q7L7X3 1001 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 KIFAP3Q92845 792 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 PRMT1Q99873 361 aaKnown RBP17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 PI4K2AQ9BTU6 479 aa17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 ZBTB12Q9Y330 459 aaPredicted RBP17.43■□□□□ 0.38
PDZRN3-201ENST00000263666 IPO5O00410 1097 aaKnown RBP17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 DDX3XO00571 662 aaKnown RBP eCLIP17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 CLDN3O15551 220 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 DDR1Q08345 913 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 TMED2Q15363 201 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 SRRM1Q8IYB3 904 aaKnown RBP17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 CHURC1Q8WUH1 139 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 ZNF148Q9UQR1 794 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 PASKQ96RG2 1323 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 NOL4O94818 638 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms