RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 RAB34Q9BZG1 259 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 CARD9Q9H257 536 aa15.27■□□□□ 0.04
SCARF1-201ENST00000263071 DDX25Q9UHL0 483 aaKnown RBP15.27■□□□□ 0.04
SCARF1-201ENST00000263071 PALM3A6NDB9 673 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-201ENST00000263071 LSM1O15116 133 aaKnown RBP15.27■□□□□ 0.03
SCARF1-201ENST00000263071 NR2F2P24468 414 aa15.27■□□□□ 0.03
SCARF1-201ENST00000263071 DHX9Q08211 1270 aaKnown RBP15.27■□□□□ 0.03
SCARF1-201ENST00000263071 KRT71Q3SY84 523 aa15.27■□□□□ 0.03
SCARF1-201ENST00000263071 TPTE2Q6XPS3 522 aa15.27■□□□□ 0.03
SCARF1-201ENST00000263071 DAAM2Q86T65 1068 aa15.27■□□□□ 0.03
SCARF1-201ENST00000263071 DGKHQ86XP1 1220 aa15.27■□□□□ 0.03
SCARF1-201ENST00000263071 ZBTB8BQ8NAP8 495 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-201ENST00000263071 CASKIN2Q8WXE0 1202 aa15.27■□□□□ 0.03
SCARF1-201ENST00000263071 CAVIN3Q969G5 261 aa15.27■□□□□ 0.03
SCARF1-201ENST00000263071 BARX2Q9UMQ3 279 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-201ENST00000263071 ATP8A1Q9Y2Q0 1164 aa15.27■□□□□ 0.03
SCARF1-201ENST00000263071 THRAP3Q9Y2W1 955 aaKnown RBP15.27■□□□□ 0.03
SCARF1-201ENST00000263071 SMAPO00193 183 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 KRIT1O00522 736 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 IFNAR2P48551 515 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 MEA1Q16626 185 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 PABPC1LQ4VXU2 614 aaKnown RBP15.26■□□□□ 0.03
SCARF1-201ENST00000263071 PRR16Q569H4 304 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 GET4Q7L5D6 327 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-201ENST00000263071 LUC7LQ9NQ29 371 aaKnown RBP15.26■□□□□ 0.03
SCARF1-201ENST00000263071 BLOC1S4Q9NUP1 217 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 INTUQ9ULD6 942 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
SCARF1-201ENST00000263071 ANO9A1A5B4 782 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 IPO5O00410 1097 aaKnown RBP15.26■□□□□ 0.03
SCARF1-201ENST00000263071 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
SCARF1-201ENST00000263071 FGFR1OPO95684 399 aaKnown RBP15.26■□□□□ 0.03
SCARF1-201ENST00000263071 RCAN1P53805 252 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 GTF2IP78347 998 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 RETREG2Q8NC44 543 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 MGARPQ8TDB4 240 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 CHMP6Q96FZ7 201 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 DHRS1Q96LJ7 313 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 ECT2Q9H8V3 914 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 TUBGCP4Q9UGJ1 667 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 LNPEPQ9UIQ6 1025 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 COL4A3BPQ9Y5P4 624 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 PENKP01210 267 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-201ENST00000263071 ITGA4P13612 1032 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 COASYQ13057 564 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 TRPM8Q7Z2W7 1104 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 MMGT1Q8N4V1 131 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 CLMNQ96JQ2 1002 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 SH2D3AQ9BRG2 576 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 TTYH3Q9C0H2 523 aa15.26■□□□□ 0.03
SCARF1-201ENST00000263071 AKAP11Q9UKA4 1901 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 C4AP0C0L4 1744 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 C4BP0C0L5 1744 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 DAPK3O43293 454 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 LRRN2O75325 713 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 ZNF76P36508 570 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 SLC44A4Q53GD3 710 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 PDXDC1Q6P996 788 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 RUFY4Q6ZNE9 571 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 PEX26Q7Z412 305 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 ELMO3Q96BJ8 720 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 ZNF653Q96CK0 615 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 TRIM11Q96F44 468 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 PNMA5Q96PV4 448 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 TRPM3Q9HCF6 1732 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-201ENST00000263071 MLXIPLQ9NP71 852 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 DNAJC17Q9NVM6 304 aaKnown RBP15.25■□□□□ 0.03
SCARF1-201ENST00000263071 MSH2P43246 934 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 PPP2R2AP63151 447 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 FBXO33Q7Z6M2 555 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 CCDC65Q8IXS2 484 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 SMYD1Q8NB12 490 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 LZICQ8WZA0 190 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 BRD8Q9H0E9 1235 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
SCARF1-201ENST00000263071 USP17L10C9JJH3 530 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 F8VZ95 297 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 ATP6V1C1P21283 382 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 FKBP3Q00688 224 aaKnown RBP15.24■□□□□ 0.03
SCARF1-201ENST00000263071 BYSLQ13895 437 aaKnown RBP15.24■□□□□ 0.03
SCARF1-201ENST00000263071 SHROOM1Q2M3G4 852 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-201ENST00000263071 NCCRP1Q6ZVX7 275 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-201ENST00000263071 SPIRE2Q8WWL2 714 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 AGAP3Q96P47 875 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 ELAC2Q9BQ52 826 aaKnown RBP15.24■□□□□ 0.03
SCARF1-201ENST00000263071 GMEB1Q9Y692 573 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 KRT38O76015 456 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 GSTA2P09210 222 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 KCNMA1Q12791 1236 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 EMC10Q5UCC4 262 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 UNC13DQ70J99 1090 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 NR1H4Q96RI1 486 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-201ENST00000263071 TRIM51Q9BSJ1 452 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 FLT1P17948 1338 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 DCDC2CA8MYV0 355 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 KCNH2Q12809 1159 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 PHLDB2Q86SQ0 1253 aa15.24■□□□□ 0.03
SCARF1-201ENST00000263071 ARHGAP18Q8N392 663 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms