RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 KIAA1024Q9UPX6 916 aa20.51■□□□□ 0.87
COPE-201ENST00000262812 TBKBP1A7MCY6 615 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 ASAP2O43150 1006 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 FGFR1P11362 822 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 PDCP20941 246 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 GPM6BQ13491 265 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 HAUS3Q68CZ6 603 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 IGSF22Q8N9C0 903 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 SNX29Q8TEQ0 813 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 SAMD11Q96NU1 681 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 RNF216Q9NWF9 866 aaPredicted RBP20.5■□□□□ 0.87
COPE-201ENST00000262812 TMEM161AQ9NX61 479 aa20.5■□□□□ 0.87
COPE-201ENST00000262812 DBR1Q9UK59 544 aaKnown RBP20.5■□□□□ 0.87
COPE-201ENST00000262812 MRPL42Q9Y6G3 142 aaKnown RBP20.5■□□□□ 0.87
COPE-201ENST00000262812 WDR81Q562E7 1941 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 ARHGEF35A5YM69 484 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 POU3F3P20264 500 aaPredicted RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 SYT1P21579 422 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 ARL2P36404 184 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 BMPR1AP36894 532 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 PRPHP41219 470 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 ATP2C1P98194 919 aaPredicted RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 MXD4Q14582 209 aaPredicted RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 SKIV2LQ15477 1246 aaKnown RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 ZRSR1Q15695 479 aaKnown RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 ECHDC2Q86YB7 292 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.49■□□□□ 0.87
COPE-201ENST00000262812 CMTR2Q8IYT2 770 aaKnown RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 ASAP3Q8TDY4 903 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 INTS4Q96HW7 963 aaKnown RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 POLR3FQ9H1D9 316 aaPredicted RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 MINDY3Q9H8M7 445 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 GPRC5CQ9NQ84 441 aa20.49■□□□□ 0.87
COPE-201ENST00000262812 DDX19AQ9NUU7 478 aaKnown RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 PIN4Q9Y237 131 aaKnown RBP20.49■□□□□ 0.87
COPE-201ENST00000262812 VWA3AA6NCI4 1184 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 TFDP1Q14186 410 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 LONRF3Q496Y0 759 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 SPOUT1Q5T280 376 aaKnown RBP20.48■□□□□ 0.87
COPE-201ENST00000262812 KRT79Q5XKE5 535 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 TWF2Q6IBS0 349 aaKnown RBP20.48■□□□□ 0.87
COPE-201ENST00000262812 PADI6Q6TGC4 694 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 BRAPQ7Z569 592 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 SRGAP1Q7Z6B7 1085 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 SNX21Q969T3 373 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 ELAC1Q9H777 363 aaKnown RBP20.48■□□□□ 0.87
COPE-201ENST00000262812 POLD4Q9HCU8 107 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 CHST12Q9NRB3 414 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 DACT1Q9NYF0 836 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 STK24Q9Y6E0 443 aa20.48■□□□□ 0.87
COPE-201ENST00000262812 H3BNC9 293 aa20.47■□□□□ 0.87
COPE-201ENST00000262812 LINC00271P0C7V0 271 aa20.47■□□□□ 0.87
COPE-201ENST00000262812 GLRA2P23416 452 aa20.47■□□□□ 0.87
COPE-201ENST00000262812 PHKA2P46019 1235 aa20.47■□□□□ 0.87
COPE-201ENST00000262812 HSCBQ8IWL3 235 aa20.47■□□□□ 0.87
COPE-201ENST00000262812 CLP1Q92989 425 aaKnown RBP20.47■□□□□ 0.87
COPE-201ENST00000262812 TRANK1O15050 2925 aa20.47■□□□□ 0.87
COPE-201ENST00000262812 A0A0U1RQF3 1178 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 INO80B-WBP1J3KQ70 363 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 CSPG5O95196 566 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 MUTP22033 750 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 CAPSQ13938 189 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 PLIN2Q99541 437 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 BHMT2Q9H2M3 363 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 TYW1Q9NV66 732 aaKnown RBP20.46■□□□□ 0.87
COPE-201ENST00000262812 DNM3Q9UQ16 869 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 RWDD3Q9Y3V2 267 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 PRUNE2Q8WUY3 3088 aa20.46■□□□□ 0.87
COPE-201ENST00000262812 LOXHD1Q8IVV2 1947 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 TTC3P53804 2025 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 E9PMD0 336 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 RB1P06400 928 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 CYP11B2P19099 503 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 PTENP60484 403 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 SF3A1Q15459 793 aaKnown RBP20.45■□□□□ 0.86
COPE-201ENST00000262812 FAM173BQ6P4H8 233 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 ABI1Q8IZP0 508 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 MCPH1Q8NEM0 835 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 MMTAG2Q9BU76 263 aaKnown RBP20.45■□□□□ 0.86
COPE-201ENST00000262812 ALG13Q9NP73 1137 aaKnown RBP20.45■□□□□ 0.86
COPE-201ENST00000262812 RNF19AQ9NV58 838 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 LMCD1Q9NZU5 365 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 HCSTQ9UBK5 93 aa20.45■□□□□ 0.86
COPE-201ENST00000262812 LRRIQ4A6NIV6 560 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 C5orf67F2Z3F1 127 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 GRM6O15303 877 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 ERLIN2O94905 339 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 EOMESO95936 686 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 HOXA11P31270 313 aaPredicted RBP20.44■□□□□ 0.86
COPE-201ENST00000262812 PTPROQ16827 1216 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 ARL6IP4Q66PJ3 421 aaKnown RBP20.44■□□□□ 0.86
COPE-201ENST00000262812 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 HELQQ8TDG4 1101 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 LPPQ93052 612 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 CASD1Q96PB1 797 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 C11orf84Q9BUA3 381 aaPredicted RBP20.44■□□□□ 0.86
COPE-201ENST00000262812 TMEM117Q9H0C3 514 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 AGPAT5Q9NUQ2 364 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 CLIC4Q9Y696 253 aa20.44■□□□□ 0.86
COPE-201ENST00000262812 HOXA2O43364 376 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms