RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 LMBR1Q8WVP7 490 aa18.16■□□□□ 0.5
PDE4C-201ENST00000262805 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
PDE4C-201ENST00000262805 SEPT11Q9NVA2 429 aaKnown RBP18.16■□□□□ 0.5
PDE4C-201ENST00000262805 AMFRQ9UKV5 643 aa18.16■□□□□ 0.5
PDE4C-201ENST00000262805 NCANO14594 1321 aa18.16■□□□□ 0.5
PDE4C-201ENST00000262805 A0A087WUV0 522 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 HMGB1P1B2RPK0 211 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 DDX39AO00148 427 aaKnown RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 PPP1R37O75864 691 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 MDH1P40925 334 aaKnown RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 ZNF131P52739 623 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 NPEPPSP55786 919 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 POU5F1Q01860 360 aaKnown RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 SF3B2Q13435 895 aaKnown RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 PTGISQ16647 500 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 AADACL2Q6P093 401 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 DAW1Q8N136 415 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 UBLCP1Q8WVY7 318 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 KAT2BQ92831 832 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 HOOK2Q96ED9 719 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 EPN3Q9H201 632 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 ERVK-5Q9HDB9 667 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 ATP8B3O60423 1300 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 CCDC188H7C350 402 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 PPP1R12BO60237 982 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 PRPF4BQ13523 1007 aaKnown RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 NFIL3Q16649 462 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 SYCE1Q8N0S2 351 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 EIF1ADQ8N9N8 165 aaKnown RBP18.15■□□□□ 0.5
PDE4C-201ENST00000262805 SLC20A1Q8WUM9 679 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 PKD2L1Q9P0L9 805 aa18.15■□□□□ 0.5
PDE4C-201ENST00000262805 DCDC2CA8MYV0 355 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 TCP10L2B9ZVM9 353 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 GCOM1H8Y6P7 765 aaPredicted RBP18.14■□□□□ 0.5
PDE4C-201ENST00000262805 FOXN3O00409 490 aaPredicted RBP18.14■□□□□ 0.5
PDE4C-201ENST00000262805 TMEM253P0C7T8 217 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 POLR2MP0CAP2 368 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 LMNB1P20700 586 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 MYL7Q01449 175 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 MAPK7Q13164 816 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 HS2ST1Q7LGA3 356 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 ZSWIM2Q8NEG5 633 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 LXNQ9BS40 222 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 MKNK1Q9BUB5 465 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.14■□□□□ 0.5
PDE4C-201ENST00000262805 APEX2Q9UBZ4 518 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 CHORDC1Q9UHD1 332 aaPredicted RBP18.14■□□□□ 0.5
PDE4C-201ENST00000262805 FRMD4BQ9Y2L6 1034 aa18.14■□□□□ 0.5
PDE4C-201ENST00000262805 HIP1RO75146 1068 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 CEP55Q53EZ4 464 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 LRIG3Q6UXM1 1119 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 TMC3Q7Z5M5 1100 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 CDAN1Q8IWY9 1227 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 C1orf131Q8NDD1 294 aaKnown RBP18.14■□□□□ 0.49
PDE4C-201ENST00000262805 LMO3Q8TAP4 145 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 CTNNBL1Q8WYA6 563 aaPredicted RBP18.14■□□□□ 0.49
PDE4C-201ENST00000262805 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.14■□□□□ 0.49
PDE4C-201ENST00000262805 ALG3Q92685 438 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 ZNF577Q9BSK1 485 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 PCIF1Q9H4Z3 704 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 SLITRK6Q9H5Y7 841 aa18.14■□□□□ 0.49
PDE4C-201ENST00000262805 CLRN2A0PK11 232 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 MYZAPP0CAP1 466 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 FKBP1AP62942 108 aaKnown RBP18.13■□□□□ 0.49
PDE4C-201ENST00000262805 ATP8B4Q8TF62 1192 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 ZNF473Q8WTR7 871 aaKnown RBP18.13■□□□□ 0.49
PDE4C-201ENST00000262805 FAM107BQ9H098 131 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.13■□□□□ 0.49
PDE4C-201ENST00000262805 FBXO28Q9NVF7 368 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 BCCIPQ9P287 314 aaKnown RBP eCLIP18.13■□□□□ 0.49
PDE4C-201ENST00000262805 EXOC3O60645 756 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 CPP00450 1065 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 BFSP1Q12934 665 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 CCDC125Q86Z20 511 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 SEC14L1Q92503 715 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 LRRC45Q96CN5 670 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 NACC1Q96RE7 527 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 SH2D3AQ9BRG2 576 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 TMOD4Q9NZQ9 345 aa18.13■□□□□ 0.49
PDE4C-201ENST00000262805 ENTPD3O75355 529 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 TMOD1P28289 359 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 CHRNA5P30532 468 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 ARHGEF19Q8IW93 802 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 MYCBPAPQ8TBZ2 947 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 GLG1Q92896 1179 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 CCT8L2Q96SF2 557 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 CNOT8Q9UFF9 292 aaKnown RBP18.12■□□□□ 0.49
PDE4C-201ENST00000262805 GOLGA6L10A6NI86 522 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 A6NNZ2 444 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 YDJCA8MPS7 323 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 ERLIN2O94905 339 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 VIL1P09327 827 aaKnown RBP18.12■□□□□ 0.49
PDE4C-201ENST00000262805 TNFAIP3P21580 790 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 DHX9Q08211 1270 aaKnown RBP18.12■□□□□ 0.49
PDE4C-201ENST00000262805 TUBB8Q3ZCM7 444 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 NLRP14Q86W24 1093 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 SYCP3Q8IZU3 236 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 STRA6Q9BX79 667 aa18.12■□□□□ 0.49
PDE4C-201ENST00000262805 PPANQ9NQ55 473 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms