RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MNX1P50219 401 aaPredicted RBP30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 STX1AQ16623 288 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 ZNF658Q5TYW1 1059 aaPredicted RBP30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 CRISPLD2Q9H0B8 497 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 FAM49AQ9H0Q0 323 aaPredicted RBP30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 GTF2IRD1Q9UHL9 959 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 PLS3P13797 630 aa30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 ZC2HC1CQ53FD0 456 aaPredicted RBP30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 DIS3LQ8TF46 1054 aaKnown RBP30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 CCDC47Q96A33 483 aaKnown RBP30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 MRPL44Q9H9J2 332 aaKnown RBP30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 SUCLA2Q9P2R7 463 aaPredicted RBP30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 PHF24Q9UPV7 400 aa30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 RRN3P2A6NIE6 340 aa30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 VTNP04004 478 aa30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 LINC01465Q8N7H1 131 aa30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 KIFAP3Q92845 792 aa30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 STARD7Q9NQZ5 370 aa30.34■■■□□ 2.45
SMARCD3-201ENST00000262188 ADGRA3Q8IWK6 1321 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 KIAA0100Q14667 2235 aaKnown RBP30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 CCDC169A6NNP5 214 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 SLC16A4O15374 487 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 PRCPP42785 496 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 NPTX2P47972 431 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 TMEM62Q0P6H9 643 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 KLHL10Q6JEL2 608 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 RHPN2Q8IUC4 686 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 TRIML1Q8N9V2 468 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 ZNF830Q96NB3 372 aaPredicted RBP30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 TIPINQ9BVW5 301 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 IKZF4Q9H2S9 585 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 PPME1Q9Y570 386 aa30.33■■■□□ 2.45
SMARCD3-201ENST00000262188 CHRM1P11229 460 aaPredicted RBP30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 GAP43P17677 238 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 HOXC8P31273 242 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 FAM178BQ8IXR5 827 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 MBLAC1A4D2B0 266 aaPredicted RBP30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 CYP2C9P11712 490 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 KCNA1Q09470 495 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 RETREG2Q8NC44 543 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 CTAGE1Q96RT6 745 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 TRMT13Q9NUP7 481 aaKnown RBP30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 ANO10Q9NW15 660 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 AKT3Q9Y243 479 aa30.32■■■□□ 2.44
SMARCD3-201ENST00000262188 PPP1R3GB7ZBB8 358 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 MAGEB2O15479 319 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 CABYRO75952 493 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 GCNT3O95395 438 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 LAMTOR4Q0VGL1 99 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 CAPSQ13938 189 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 KIAA0319LQ8IZA0 1049 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 WNT8BQ93098 351 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 TSPY26PQ9H489 355 aa30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 LARSQ9P2J5 1176 aaKnown RBP30.31■■■□□ 2.44
SMARCD3-201ENST00000262188 K7ENM7 598 aa30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 PRPF6O94906 941 aaKnown RBP30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 SRGAP2CP0DJJ0 459 aa30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 IER5Q5VY09 327 aa30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 PSPC1Q8WXF1 523 aaKnown RBP30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 SENP6Q9GZR1 1112 aaPredicted RBP30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 LRRIQ4A6NIV6 560 aa30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 GJA8P48165 433 aa30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 DMP1Q13316 513 aaPredicted RBP30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 NELFCDQ8IXH7 590 aa30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 DNAJB3Q8WWF6 145 aa30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 NLRP4Q96MN2 994 aa30.3■■■□□ 2.44
SMARCD3-201ENST00000262188 JPH2Q9BR39 696 aaPredicted RBP30.29■■■□□ 2.44
SMARCD3-201ENST00000262188 OLFML3Q9NRN5 406 aa30.29■■■□□ 2.44
SMARCD3-201ENST00000262188 ATN1P54259 1190 aaPredicted RBP30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 STX17P56962 302 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 ZNF720Q7Z2F6 126 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 SCFD1Q8WVM8 642 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 TCP11Q8WWU5 503 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 IFT74Q96LB3 600 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 KMT5AQ9NQR1 393 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 USP20Q9Y2K6 914 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 DNM2P50570 870 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 PSMD2Q13200 908 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 RNF214Q8ND24 703 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 MED15Q96RN5 788 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 TRPV6Q9H1D0 765 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 SEL1LQ9UBV2 794 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 CTNND2Q9UQB3 1225 aa30.28■■■□□ 2.44
SMARCD3-201ENST00000262188 CSDE1O75534 798 aaKnown RBP30.27■■■□□ 2.44
SMARCD3-201ENST00000262188 HOXD13P35453 343 aa30.27■■■□□ 2.44
SMARCD3-201ENST00000262188 PTGISQ16647 500 aa30.27■■■□□ 2.44
SMARCD3-201ENST00000262188 EXOC8Q8IYI6 725 aa30.27■■■□□ 2.44
SMARCD3-201ENST00000262188 ADSSL1Q8N142 457 aa30.27■■■□□ 2.44
SMARCD3-201ENST00000262188 RNF149Q8NC42 400 aa30.27■■■□□ 2.44
SMARCD3-201ENST00000262188 GAS2O43903 313 aaKnown RBP30.26■■■□□ 2.44
SMARCD3-201ENST00000262188 EPM2AIP1Q7L775 607 aaPredicted RBP30.26■■■□□ 2.44
SMARCD3-201ENST00000262188 HAUS6Q7Z4H7 955 aa30.26■■■□□ 2.44
SMARCD3-201ENST00000262188 SESTD1Q86VW0 696 aa30.26■■■□□ 2.44
SMARCD3-201ENST00000262188 TMEM161BQ8NDZ6 487 aa30.26■■■□□ 2.44
SMARCD3-201ENST00000262188 GINS2Q9Y248 185 aa30.26■■■□□ 2.44
SMARCD3-201ENST00000262188 GNAT1P11488 350 aa30.26■■■□□ 2.43
SMARCD3-201ENST00000262188 TMOD1P28289 359 aa30.26■■■□□ 2.43
SMARCD3-201ENST00000262188 PMS1P54277 932 aaKnown RBP30.26■■■□□ 2.43
SMARCD3-201ENST00000262188 NCKAP1LP55160 1127 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms