RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 NR3C1P04150 777 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 KPNA1P52294 538 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-202ENST00000261517 BIRC2Q13490 618 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 FAM151AQ8WW52 585 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 MAGOHBQ96A72 148 aaKnown RBP4.62□□□□□ -1.67
VPS13C-202ENST00000261517 NUDCD1Q96RS6 583 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 PHACTR1Q9C0D0 580 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 GPBP1L1Q9HC44 474 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-202ENST00000261517 TMEM63CQ9P1W3 806 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 COL3A1P02461 1466 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-202ENST00000261517 IGSF9BQ9UPX0 1349 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 CHD4Q14839 1912 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 CBX1P83916 185 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 LCORLQ8N3X6 602 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 KCTD6Q8NC69 237 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 NLRP7Q8WX94 980 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF302Q9NR11 478 aa4.62□□□□□ -1.67
VPS13C-202ENST00000261517 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.62□□□□□ -1.67
VPS13C-202ENST00000261517 CETPP11597 493 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 MSH2P43246 934 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 COG2Q14746 738 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 FBXO33Q7Z6M2 555 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 CCNJLQ8IV13 435 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ANTXR1Q9H6X2 564 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PARVAQ9NVD7 372 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 TLK1Q9UKI8 766 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PCDHA6Q9UN73 950 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF148Q9UQR1 794 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PCDHA8Q9Y5H6 950 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 NNMTP40261 264 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 HADHAP40939 763 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ENPEPQ07075 957 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 EPAS1Q99814 870 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 JPH1Q9HDC5 661 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 SPTLC3Q9NUV7 552 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 RRN3Q9NYV6 651 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ANGPTL2Q9UKU9 493 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 TCP10L2B9ZVM9 353 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PCSK1P29120 753 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 VEPH1Q14D04 833 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PPP1R13BQ96KQ4 1090 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 UBN1Q9NPG3 1134 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PCDHA13Q9Y5I0 950 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 MYH3P11055 1940 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 SNUPNO95149 360 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 MOCS3O95396 460 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 IGKV5-2P06315 115 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 TGFB3P10600 412 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 RALAP11233 206 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 HARSP12081 509 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 LAMC2Q13753 1193 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 KIAA1755Q5JYT7 1200 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 RSRC2Q7L4I2 434 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 GFM2Q969S9 779 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF518BQ9C0D4 1074 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 MROH8Q9H579 483 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 AAASQ9NRG9 546 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 CDC27P30260 824 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ETFBP38117 255 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 GPC3P51654 580 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 FOXO4P98177 505 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 MOV10L1Q9BXT6 1211 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ZMYND12Q9H0C1 365 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 H3BRJ5 948 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 HOXB6P17509 224 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 DNAJB2P25686 324 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 CPT1AP50416 773 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 LRIG3Q6UXM1 1119 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ENAHQ8N8S7 591 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 NHEJ1Q9H9Q4 299 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 SERPINB9P50453 376 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PHEXP78562 749 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF543Q08ER8 600 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 NBPF10Q6P3W6 841 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 DPH6Q7L8W6 267 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 KLHDC4Q8TBB5 520 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 GMCL1Q96IK5 515 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PIGSQ96S52 555 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 SRPK1Q96SB4 655 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 NDEL1Q9GZM8 345 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PRMT7Q9NVM4 692 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 CLIC4Q9Y696 253 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 INO80B-WBP1J3KQ70 363 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 THOC5Q13769 683 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF699Q32M78 642 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 KIAA1841Q6NSI8 718 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 TNIP2Q8NFZ5 429 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 RFFLQ8WZ73 363 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 MMP19Q99542 508 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 BRD8Q9H0E9 1235 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 FRMPD2Q68DX3 1309 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 DLATP10515 647 aaKnown RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 GTF2A1P52655 376 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 SNX1Q13596 522 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 IER5Q5VY09 327 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PADI6Q6TGC4 694 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 MCCC1Q96RQ3 725 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-202ENST00000261517 PAGR1Q9BTK6 254 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 GPR75-ASB3A0A0A6YYF3 556 aa4.61□□□□□ -1.67
VPS13C-202ENST00000261517 H7C0C1 242 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms