RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 ARL4AP40617 200 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 GCLMP48507 274 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 ITIH3Q06033 890 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 MAP1SQ66K74 1059 aaPredicted RBP17.11■□□□□ 0.33
SYT1-201ENST00000261205 CERS5Q8N5B7 392 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 SYT2Q8N9I0 419 aaPredicted RBP17.11■□□□□ 0.33
SYT1-201ENST00000261205 RNF139Q8WU17 664 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 TRIM62Q9BVG3 475 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 CALB1P05937 261 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 CD58P19256 250 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 GLT1D1Q96MS3 346 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 TMEM60Q9H2L4 133 aa17.11■□□□□ 0.33
SYT1-201ENST00000261205 TRAPPC3O43617 180 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 ACTR2P61160 394 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 OR6B2Q6IFH4 312 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 PKNOX2Q96KN3 472 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 REEP2Q9BRK0 252 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 SLC38A10Q9HBR0 1119 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 DIS3Q9Y2L1 958 aaKnown RBP17.1■□□□□ 0.33
SYT1-201ENST00000261205 VWA5AO00534 786 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 ARL13BQ3SXY8 428 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 SYTL5Q8TDW5 730 aaPredicted RBP17.1■□□□□ 0.33
SYT1-201ENST00000261205 PDCD2LQ9BRP1 358 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.33
SYT1-201ENST00000261205 JRKLQ9Y4A0 524 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
SYT1-201ENST00000261205 BZW1Q7L1Q6 419 aaKnown RBP17.1■□□□□ 0.33
SYT1-201ENST00000261205 SOCS4Q8WXH5 440 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 LRRC37A3O60309 1634 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 TRIM49BA6NDI0 452 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 IL18RAPO95256 599 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 PTPRAP18433 802 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 BRD3Q15059 726 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 STILQ15468 1287 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 PSMB7Q99436 277 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 CDC23Q9UJX2 597 aa17.1■□□□□ 0.33
SYT1-201ENST00000261205 PFDN6O15212 129 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 CASP1P29466 404 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 GNASQ5JWF2 1037 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 TOGARAM2Q6ZUX3 1019 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 PCSK9Q8NBP7 692 aaKnown RBP17.09■□□□□ 0.33
SYT1-201ENST00000261205 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
SYT1-201ENST00000261205 MAF1Q9H063 256 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 SKIP12755 728 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 CCHCR1Q8TD31 782 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 PXMP2Q9NR77 195 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 P4HA2O15460 535 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
SYT1-201ENST00000261205 A0A087WWV3 80 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 MYMKA6NI61 221 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 PDHXO00330 501 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 CYP2C9P11712 490 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 PHBP35232 272 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 EHHADHQ08426 723 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 IFRD2Q12894 506 aaPredicted RBP17.09■□□□□ 0.33
SYT1-201ENST00000261205 PPP1R21Q6ZMI0 780 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 SLC38A7Q9NVC3 462 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 PCDHA13Q9Y5I0 950 aa17.09■□□□□ 0.33
SYT1-201ENST00000261205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.09■□□□□ 0.33
SYT1-201ENST00000261205 EFCAB8A8MWE9 144 aa17.08■□□□□ 0.33
SYT1-201ENST00000261205 RIOK3O14730 519 aaKnown RBP17.08■□□□□ 0.33
SYT1-201ENST00000261205 MYCP01106 439 aaPredicted RBP17.08■□□□□ 0.33
SYT1-201ENST00000261205 MIF4GDA9UHW6 222 aaKnown RBP17.08■□□□□ 0.32
SYT1-201ENST00000261205 IFNB1P01574 187 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 INTS2Q9H0H0 1204 aaKnown RBP17.08■□□□□ 0.32
SYT1-201ENST00000261205 PRPSAP1Q14558 356 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 SMC1BQ8NDV3 1235 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 MYRIPQ8NFW9 859 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 TNIP3Q96KP6 325 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 VTA1Q9NP79 307 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 GOLGA8SH3BPF8 625 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 PRPSAP2O60256 369 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 NMT1P30419 496 aaKnown RBP17.08■□□□□ 0.32
SYT1-201ENST00000261205 CATSPER3Q86XQ3 398 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 MTMR14Q8NCE2 650 aa17.08■□□□□ 0.32
SYT1-201ENST00000261205 PAIP2Q9BPZ3 127 aaKnown RBP17.08■□□□□ 0.32
SYT1-201ENST00000261205 SART1O43290 800 aaKnown RBP17.07■□□□□ 0.32
SYT1-201ENST00000261205 CD4P01730 458 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 MYBL1P10243 752 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 TCF7P36402 384 aaPredicted RBP17.07■□□□□ 0.32
SYT1-201ENST00000261205 RBP5P82980 135 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 PPP1R13BQ96KQ4 1090 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 TRIM31Q9BZY9 425 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 ZNF148Q9UQR1 794 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 PTPAQ15257 358 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 METTL7BQ6UX53 244 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 ANKS4BQ8N8V4 417 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 SELENOSQ9BQE4 189 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 HSPBP1Q9NZL4 362 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 ADAM22Q9P0K1 906 aa17.07■□□□□ 0.32
SYT1-201ENST00000261205 PIN4Q9Y237 131 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms