RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 CD207Q9UJ71 328 aa18.95■□□□□ 0.62
CGREF1-201ENST00000260595 FAM205CA6NFA0 338 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 CCNT1O60563 726 aaKnown RBP18.94■□□□□ 0.62
CGREF1-201ENST00000260595 EOMESO95936 686 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 P4HBP07237 508 aaKnown RBP18.94■□□□□ 0.62
CGREF1-201ENST00000260595 NDUFV1P49821 464 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 DNM2P50570 870 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 NPEPPSP55786 919 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 NR5A1Q13285 461 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 ZNF410Q86VK4 478 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 MICAL1Q8TDZ2 1067 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 WASF1Q92558 559 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 CYP26B1Q9NR63 512 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 CHST12Q9NRB3 414 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 LZTS1Q9Y250 596 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 PLXNA4Q9HCM2 1894 aa18.94■□□□□ 0.62
CGREF1-201ENST00000260595 FAM86C2PA6NEL3 165 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 PER2O15055 1255 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 SPIRE1Q08AE8 756 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 COASYQ13057 564 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 EPHA7Q15375 998 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 KCNT2Q6UVM3 1135 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 RHPN2Q8IUC4 686 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 KSR1Q8IVT5 923 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 LRRC43Q8N309 656 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 RNF169Q8NCN4 708 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 MRPS27Q92552 414 aaKnown RBP18.93■□□□□ 0.62
CGREF1-201ENST00000260595 GTF3C6Q969F1 213 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 NAP1L4Q99733 375 aaKnown RBP18.93■□□□□ 0.62
CGREF1-201ENST00000260595 TRAIPQ9BWF2 469 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 TLE6Q9H808 572 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 DACT1Q9NYF0 836 aa18.93■□□□□ 0.62
CGREF1-201ENST00000260595 PBX3P40426 434 aa18.92■□□□□ 0.62
CGREF1-201ENST00000260595 DUSP6Q16828 381 aa18.92■□□□□ 0.62
CGREF1-201ENST00000260595 PDE12Q6L8Q7 609 aaKnown RBP18.92■□□□□ 0.62
CGREF1-201ENST00000260595 C4orf19Q8IY42 314 aa18.92■□□□□ 0.62
CGREF1-201ENST00000260595 ABI1Q8IZP0 508 aa18.92■□□□□ 0.62
CGREF1-201ENST00000260595 SMRP1Q8NCR6 262 aa18.92■□□□□ 0.62
CGREF1-201ENST00000260595 NSUN7Q8NE18 718 aaKnown RBP18.92■□□□□ 0.62
CGREF1-201ENST00000260595 VN1R2Q8NFZ6 395 aa18.92■□□□□ 0.62
CGREF1-201ENST00000260595 JPH2Q9BR39 696 aaPredicted RBP18.92■□□□□ 0.62
CGREF1-201ENST00000260595 DHX33Q9H6R0 707 aaKnown RBP18.92■□□□□ 0.62
CGREF1-201ENST00000260595 IFT122Q9HBG6 1241 aa18.92■□□□□ 0.62
CGREF1-201ENST00000260595 BARX2Q9UMQ3 279 aaPredicted RBP18.92■□□□□ 0.62
CGREF1-201ENST00000260595 DKC1O60832 514 aaKnown RBP eCLIP18.91■□□□□ 0.62
CGREF1-201ENST00000260595 ALADP13716 330 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 SFPQP23246 707 aaKnown RBP eCLIP18.91■□□□□ 0.62
CGREF1-201ENST00000260595 KRT2P35908 639 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 PHKA2P46019 1235 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 RBM10P98175 930 aaKnown RBP18.91■□□□□ 0.62
CGREF1-201ENST00000260595 KCNC3Q14003 757 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 HELQQ8TDG4 1101 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 CEP170P1Q96L14 293 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 ZNF558Q96NG5 402 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 CDCA3Q99618 268 aaPredicted RBP18.91■□□□□ 0.62
CGREF1-201ENST00000260595 INO80BQ9C086 356 aaPredicted RBP18.91■□□□□ 0.62
CGREF1-201ENST00000260595 RGL1Q9NZL6 768 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 PPME1Q9Y570 386 aa18.91■□□□□ 0.62
CGREF1-201ENST00000260595 DCXO43602 365 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 SEC24BO95487 1268 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 ST3GAL1Q11201 340 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 SLC39A11Q8N1S5 342 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 SLC7A3Q8WY07 619 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 DYDC2Q96IM9 177 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 NLRP4Q96MN2 994 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 LXNQ9BS40 222 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 SPG21Q9NZD8 308 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 PUF60Q9UHX1 559 aaKnown RBP18.9■□□□□ 0.62
CGREF1-201ENST00000260595 COL4A3BPQ9Y5P4 624 aa18.9■□□□□ 0.62
CGREF1-201ENST00000260595 BTBD18B2RXH4 712 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 WNT7AO00755 349 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 ZBTB39O15060 712 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 JAK2O60674 1132 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 ZNF623O75123 536 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 YWHABP31946 246 aaKnown RBP18.89■□□□□ 0.61
CGREF1-201ENST00000260595 PPM1AP35813 382 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 RFC5P40937 340 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 NEK4P51957 841 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 CTTNQ14247 550 aaKnown RBP18.89■□□□□ 0.61
CGREF1-201ENST00000260595 PLPP4Q5VZY2 271 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 NCAPH2Q6IBW4 605 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 SLFN12Q8IYM2 578 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 PRPF31Q8WWY3 499 aaKnown RBP18.89■□□□□ 0.61
CGREF1-201ENST00000260595 TMEM143Q96AN5 459 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 POP1Q99575 1024 aaKnown RBP18.89■□□□□ 0.61
CGREF1-201ENST00000260595 TCF25Q9BQ70 676 aa18.89■□□□□ 0.61
CGREF1-201ENST00000260595 NGRNQ9NPE2 291 aaKnown RBP18.89■□□□□ 0.61
CGREF1-201ENST00000260595 PIN4Q9Y237 131 aaKnown RBP18.89■□□□□ 0.61
CGREF1-201ENST00000260595 MEIS3P2A8K0S8 358 aa18.88■□□□□ 0.61
CGREF1-201ENST00000260595 HIDE1A8MVS5 230 aa18.88■□□□□ 0.61
CGREF1-201ENST00000260595 PRR33A8MZF0 331 aa18.88■□□□□ 0.61
CGREF1-201ENST00000260595 MARCH6O60337 910 aa18.88■□□□□ 0.61
CGREF1-201ENST00000260595 SLITRK3O94933 977 aa18.88■□□□□ 0.61
CGREF1-201ENST00000260595 BAG4O95429 457 aaKnown RBP18.88■□□□□ 0.61
CGREF1-201ENST00000260595 POLGP54098 1239 aaPredicted RBP18.88■□□□□ 0.61
CGREF1-201ENST00000260595 KRT17Q04695 432 aa18.88■□□□□ 0.61
CGREF1-201ENST00000260595 TWF2Q6IBS0 349 aaKnown RBP18.88■□□□□ 0.61
CGREF1-201ENST00000260595 CATSPER4Q7RTX7 472 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms