RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 LAG3P18627 525 aa21.32■■□□□ 1
TM6SF1-201ENST00000258909 RBM10P98175 930 aaKnown RBP21.32■■□□□ 1
TM6SF1-201ENST00000258909 EFHBQ8N7U6 833 aa21.32■■□□□ 1
TM6SF1-201ENST00000258909 HELQQ8TDG4 1101 aa21.32■■□□□ 1
TM6SF1-201ENST00000258909 WASF1Q92558 559 aa21.32■■□□□ 1
TM6SF1-201ENST00000258909 GTF3C6Q969F1 213 aa21.32■■□□□ 1
TM6SF1-201ENST00000258909 NLRP4Q96MN2 994 aa21.32■■□□□ 1
TM6SF1-201ENST00000258909 BMP2KQ9NSY1 1161 aaPredicted RBP21.32■■□□□ 1
TM6SF1-201ENST00000258909 RGL1Q9NZL6 768 aa21.32■■□□□ 1
TM6SF1-201ENST00000258909 BARX2Q9UMQ3 279 aaPredicted RBP21.32■■□□□ 1
TM6SF1-201ENST00000258909 A0A0U1RQF3 1178 aa21.31■■□□□ 1
TM6SF1-201ENST00000258909 SEC24BO95487 1268 aa21.31■■□□□ 1
TM6SF1-201ENST00000258909 ATF7P17544 494 aaPredicted RBP21.31■■□□□ 1
TM6SF1-201ENST00000258909 KRT2P35908 639 aa21.31■■□□□ 1
TM6SF1-201ENST00000258909 NEK4P51957 841 aa21.31■■□□□ 1
TM6SF1-201ENST00000258909 UBE3AQ05086 875 aa21.31■■□□□ 1
TM6SF1-201ENST00000258909 SMAD2Q15796 467 aaKnown RBP21.31■■□□□ 1
TM6SF1-201ENST00000258909 LONRF3Q496Y0 759 aa21.31■■□□□ 1
TM6SF1-201ENST00000258909 NCAPH2Q6IBW4 605 aa21.31■■□□□ 1
TM6SF1-201ENST00000258909 MSLNLQ96KJ4 702 aa21.31■■□□□ 1
TM6SF1-201ENST00000258909 TRIOO75962 3097 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 JAK2O60674 1132 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 GLP2RO95838 553 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 P4HBP07237 508 aaKnown RBP21.3■■□□□ 1
TM6SF1-201ENST00000258909 SMAD4Q13485 552 aaKnown RBP21.3■■□□□ 1
TM6SF1-201ENST00000258909 KCNT2Q6UVM3 1135 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 ZNF598Q86UK7 904 aaKnown RBP21.3■■□□□ 1
TM6SF1-201ENST00000258909 ADHFE1Q8IWW8 467 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 LRRC43Q8N309 656 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 NSUN7Q8NE18 718 aaKnown RBP21.3■■□□□ 1
TM6SF1-201ENST00000258909 TNFRSF25Q93038 417 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 CEP170P1Q96L14 293 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 DACT1Q9NYF0 836 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 PRKAG3Q9UGI9 489 aa21.3■■□□□ 1
TM6SF1-201ENST00000258909 ZBTB39O15060 712 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 TBX3O15119 743 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 SFPQP23246 707 aaKnown RBP eCLIP21.29■■□□□ 1
TM6SF1-201ENST00000258909 CDC42EP1Q00587 391 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 CYP4A11Q02928 519 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 CTTNQ14247 550 aaKnown RBP21.29■■□□□ 1
TM6SF1-201ENST00000258909 EPHA7Q15375 998 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 CSPP1Q1MSJ5 1256 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 PLPP4Q5VZY2 271 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 LPPQ93052 612 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 TMEM143Q96AN5 459 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 DYDC2Q96IM9 177 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 ZNF558Q96NG5 402 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 NAP1L4Q99733 375 aaKnown RBP21.29■■□□□ 1
TM6SF1-201ENST00000258909 LXNQ9BS40 222 aa21.29■■□□□ 1
TM6SF1-201ENST00000258909 PIN4Q9Y237 131 aaKnown RBP21.29■■□□□ 1
TM6SF1-201ENST00000258909 C19orf67A6NJJ6 358 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 GPR37L1O60883 481 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 EOMESO95936 686 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 POLGP54098 1239 aaPredicted RBP21.28■■□□□ 1
TM6SF1-201ENST00000258909 SPIRE1Q08AE8 756 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 TWF2Q6IBS0 349 aaKnown RBP21.28■■□□□ 1
TM6SF1-201ENST00000258909 CATSPER4Q7RTX7 472 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 ZNF410Q86VK4 478 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 VN1R2Q8NFZ6 395 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 SLC7A3Q8WY07 619 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 MRPS27Q92552 414 aaKnown RBP21.28■■□□□ 1
TM6SF1-201ENST00000258909 JPH2Q9BR39 696 aaPredicted RBP21.28■■□□□ 1
TM6SF1-201ENST00000258909 BRMS1Q9HCU9 246 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 CHST12Q9NRB3 414 aa21.28■■□□□ 1
TM6SF1-201ENST00000258909 BTBD18B2RXH4 712 aa21.27■■□□□ 1
TM6SF1-201ENST00000258909 FSCN2O14926 492 aa21.27■■□□□ 1
TM6SF1-201ENST00000258909 DKC1O60832 514 aaKnown RBP eCLIP21.27■■□□□ 1
TM6SF1-201ENST00000258909 PHKA2P46019 1235 aa21.27■■□□□ 1
TM6SF1-201ENST00000258909 PLCB3Q01970 1234 aa21.27■■□□□ 1
TM6SF1-201ENST00000258909 TCF25Q9BQ70 676 aa21.27■■□□□ 1
TM6SF1-201ENST00000258909 INO80BQ9C086 356 aaPredicted RBP21.27■■□□□ 1
TM6SF1-201ENST00000258909 IFT122Q9HBG6 1241 aa21.27■■□□□ 1
TM6SF1-201ENST00000258909 ENTPD7Q9NQZ7 604 aa21.27■■□□□ 1
TM6SF1-201ENST00000258909 PUF60Q9UHX1 559 aaKnown RBP21.27■■□□□ 1
TM6SF1-201ENST00000258909 COL4A3BPQ9Y5P4 624 aa21.27■■□□□ 1
TM6SF1-201ENST00000258909 MEIS3P2A8K0S8 358 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 NT5C1B-RDH14C9J2C7 533 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 WNT7AO00755 349 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 BAG4O95429 457 aaKnown RBP21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 EYA4O95677 639 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 SRGAP2CP0DJJ0 459 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 YWHABP31946 246 aaKnown RBP21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 ST3GAL1Q11201 340 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 DUSP6Q16828 381 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 XKR9Q5GH70 373 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 TPH2Q8IWU9 490 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 C4orf19Q8IY42 314 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 PRPF31Q8WWY3 499 aaKnown RBP21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 DHX33Q9H6R0 707 aaKnown RBP21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 ARID2Q68CP9 1835 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 HIDE1A8MVS5 230 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 ALADP13716 330 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 COASYQ13057 564 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 DIS3L2Q8IYB7 885 aaKnown RBP21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 SLFN12Q8IYM2 578 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 SMRP1Q8NCR6 262 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 SPG21Q9NZD8 308 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 LZTS1Q9Y250 596 aa21.26■□□□□ 0.99
TM6SF1-201ENST00000258909 DCXO43602 365 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms