RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 RBAKQ9NYW8 714 aaPredicted RBP16.13■□□□□ 0.17
UBE4B-201ENST00000253251 ADAM22Q9P0K1 906 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 MYMKA6NI61 221 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 OATP04181 439 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 SRGAP2BP0DMP2 458 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 GUCY2FP51841 1108 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 GTF2A2P52657 109 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 FAM71BQ8TC56 605 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 CDKL2Q92772 493 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 RBM41Q96IZ5 413 aaKnown RBP16.13■□□□□ 0.17
UBE4B-201ENST00000253251 REEP2Q9BRK0 252 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 RIC1Q4ADV7 1423 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 SYNGAP1Q96PV0 1343 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 P4HA2O15460 535 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 HUS1O60921 280 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
UBE4B-201ENST00000253251 CEP85LQ5SZL2 805 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 PDXDC1Q6P996 788 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 NME8Q8N427 588 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 OR6J1Q8NGC5 347 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 RAB3IL1Q8TBN0 382 aa16.13■□□□□ 0.17
UBE4B-201ENST00000253251 TTC26A0AVF1 554 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 GIPC1O14908 333 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 IL17RAQ96F46 866 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 ZNF560Q96MR9 790 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 PPP1R9AQ9ULJ8 1098 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 HEXIM1O94992 359 aaKnown RBP16.12■□□□□ 0.17
UBE4B-201ENST00000253251 GCLCP48506 637 aaPredicted RBP16.12■□□□□ 0.17
UBE4B-201ENST00000253251 ARL13BQ3SXY8 428 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 TWF2Q6IBS0 349 aaKnown RBP16.12■□□□□ 0.17
UBE4B-201ENST00000253251 KIAA1841Q6NSI8 718 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 ELMSAN1Q6PJG2 1045 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 OR6B3Q8NGW1 331 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 CCT6BQ92526 530 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 ATP2C2O75185 946 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 DRAP1Q14919 205 aaPredicted RBP16.12■□□□□ 0.17
UBE4B-201ENST00000253251 CYFIP1Q7L576 1253 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 KIAA1683Q9H0B3 1180 aa16.12■□□□□ 0.17
UBE4B-201ENST00000253251 MKRN1Q9UHC7 482 aaKnown RBP16.12■□□□□ 0.17
UBE4B-201ENST00000253251 CCL15-CCL14A0A0B4J2E2 113 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
UBE4B-201ENST00000253251 ZNF189O75820 626 aaPredicted RBP16.11■□□□□ 0.17
UBE4B-201ENST00000253251 FTCDO95954 541 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 SHMT1P34896 483 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 SLMAPQ14BN4 828 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 CCL15Q16663 113 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 MAP7D1Q3KQU3 841 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 KAZNQ674X7 775 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 TOGARAM2Q6ZUX3 1019 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 CTAGE3PQ8IX95 158 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 TTC13Q8NBP0 860 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 WHAMMQ8TF30 809 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 MROH8Q9H579 483 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 KCNH7Q9NS40 1196 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 CNOT8Q9UFF9 292 aaKnown RBP16.11■□□□□ 0.17
UBE4B-201ENST00000253251 IPO11Q9UI26 975 aaKnown RBP16.11■□□□□ 0.17
UBE4B-201ENST00000253251 PRKCBP05771 671 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 RPS6P62753 249 aaKnown RBP16.11■□□□□ 0.17
UBE4B-201ENST00000253251 SYT2Q8N9I0 419 aaPredicted RBP16.11■□□□□ 0.17
UBE4B-201ENST00000253251 NRXN3Q9Y4C0 1643 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 DDTLA6NHG4 134 aaPredicted RBP16.11■□□□□ 0.17
UBE4B-201ENST00000253251 TAP1Q03518 808 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 CCDC110Q8TBZ0 833 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 AGBL1Q96MI9 1066 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 SSU72P8A0A1W2PR75 194 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 HBP1O60381 514 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 SOX5P35711 763 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 SREBF2Q12772 1141 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 CUL1Q13616 776 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 Q4G0T1 1027 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 IER5Q5VY09 327 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 SUCLA2Q9P2R7 463 aaPredicted RBP16.11■□□□□ 0.17
UBE4B-201ENST00000253251 ADGRG1Q9Y653 693 aa16.11■□□□□ 0.17
UBE4B-201ENST00000253251 NMT1P30419 496 aaKnown RBP16.1■□□□□ 0.17
UBE4B-201ENST00000253251 GABPAQ06546 454 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 PTPN21Q16825 1174 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 ACER1Q8TDN7 264 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.1■□□□□ 0.17
UBE4B-201ENST00000253251 TTLL3Q9Y4R7 772 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 EMSYQ7Z589 1322 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 PODXLO00592 558 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 TEX33O43247 280 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 ABL1P00519 1130 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 GARSP41250 739 aaKnown RBP16.1■□□□□ 0.17
UBE4B-201ENST00000253251 OAZ1P54368 228 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 TFDP2Q14188 446 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 CCDC6Q16204 474 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 SCARA5Q6ZMJ2 495 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 KCNH4Q9UQ05 1017 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 RNF40O75150 1001 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 KCTD6Q8NC69 237 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 PLCD4Q9BRC7 762 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.1■□□□□ 0.17
UBE4B-201ENST00000253251 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
UBE4B-201ENST00000253251 GOLGA8CPA6NN73 597 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 SGK1O00141 431 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 CIITAP33076 1130 aa16.1■□□□□ 0.17
UBE4B-201ENST00000253251 EMC2Q15006 297 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms