RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 GLE1Q53GS7 698 aaKnown RBP16.97■□□□□ 0.31
SIN3B-201ENST00000248054 CHST13Q8NET6 341 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 RSAD2Q8WXG1 361 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 PRMT6Q96LA8 375 aaPredicted RBP16.97■□□□□ 0.31
SIN3B-201ENST00000248054 MMP19Q99542 508 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 KLHL14Q9P2G3 628 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 LRRC37A3O60309 1634 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 MYMKA6NI61 221 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 MIF4GDA9UHW6 222 aaKnown RBP16.97■□□□□ 0.31
SIN3B-201ENST00000248054 HIP1RO75146 1068 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 TFAMQ00059 246 aaKnown RBP16.97■□□□□ 0.31
SIN3B-201ENST00000248054 SWSAP1Q6NVH7 229 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 NLRP7Q8WX94 980 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 RPS6KC1Q96S38 1066 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 TMX2Q9Y320 296 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 DGAT1O75907 488 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 ICAM1P05362 532 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 TM4SF1P30408 202 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 NFIAQ12857 509 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 KRT81Q14533 505 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 EEPD1Q7L9B9 569 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 SCYL3Q8IZE3 742 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 TMEM39BQ9GZU3 492 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 MRFAP1Q9Y605 127 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 USH1CQ9Y6N9 552 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 CCDC188H7C350 402 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 CLDN3O15551 220 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 KRT15P19012 456 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
SIN3B-201ENST00000248054 STX2P32856 288 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 DEFB129Q9H1M3 183 aa16.97■□□□□ 0.31
SIN3B-201ENST00000248054 SLC16A4O15374 487 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 SLC25A27O95847 323 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 EFNA5P52803 228 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 IRX4P78413 519 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 IFT88Q13099 833 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 UAP1Q16222 522 aaPredicted RBP16.96■□□□□ 0.31
SIN3B-201ENST00000248054 KYAT1Q16773 422 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 WDR24Q96S15 920 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 PPANQ9NQ55 473 aaKnown RBP16.96■□□□□ 0.31
SIN3B-201ENST00000248054 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 TBXAS1P24557 533 aaPredicted RBP16.96■□□□□ 0.31
SIN3B-201ENST00000248054 RBBP5Q15291 538 aaKnown RBP16.96■□□□□ 0.31
SIN3B-201ENST00000248054 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 VPS52Q8N1B4 723 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 DONSONQ9NYP3 566 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 ANGEL2Q5VTE6 544 aaKnown RBP16.96■□□□□ 0.31
SIN3B-201ENST00000248054 HAUS6Q7Z4H7 955 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 TTC39CQ8N584 583 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 KRT39Q6A163 491 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 HVCN1Q96D96 273 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 TBC1D31Q96DN5 1066 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 OTUD5Q96G74 571 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 MKNK1Q9BUB5 465 aa16.96■□□□□ 0.31
SIN3B-201ENST00000248054 GNAT1P11488 350 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 CNGA1P29973 690 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 MAP3K21Q5TCX8 1036 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 ANKRD20A3Q5VUR7 823 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 SREBF1P36956 1147 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 CCDC38Q502W7 563 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 CCHCR1Q8TD31 782 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 KRT12Q99456 494 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 PSMD1Q99460 953 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 A0A1W2PQJ5 194 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 SHMT1P34896 483 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
SIN3B-201ENST00000248054 CRY2Q49AN0 593 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 MED10Q9BTT4 135 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 GOLGA8IPA6NC78 632 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 GOLGA8JA6NMD2 632 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 GMNNO75496 209 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 NR3C2P08235 984 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 ADCY8P40145 1251 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 GUCY2DQ02846 1103 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 BAATQ14032 418 aaPredicted RBP16.95■□□□□ 0.3
SIN3B-201ENST00000248054 MORC4Q8TE76 937 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 DPF2Q92785 391 aa16.95■□□□□ 0.3
SIN3B-201ENST00000248054 INTS2Q9H0H0 1204 aaKnown RBP16.95■□□□□ 0.3
SIN3B-201ENST00000248054 POLR3FQ9H1D9 316 aaPredicted RBP16.95■□□□□ 0.3
SIN3B-201ENST00000248054 PPP1R3GB7ZBB8 358 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 ATF2P15336 505 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 STK4Q13043 487 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 DNAJC24Q6P3W2 148 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 ATP2A3Q93084 1043 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 GPRASP2Q96D09 838 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 REEP2Q9BRK0 252 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 FUT8Q9BYC5 575 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 ANKEF1Q9NU02 776 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 RGL1Q9NZL6 768 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 SRGAP2CP0DJJ0 459 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 KCTD16Q68DU8 428 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 MAGOHBQ96A72 148 aaKnown RBP16.94■□□□□ 0.3
SIN3B-201ENST00000248054 MRPL4Q9BYD3 311 aaKnown RBP16.94■□□□□ 0.3
SIN3B-201ENST00000248054 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
SIN3B-201ENST00000248054 GGA3Q9NZ52 723 aa16.94■□□□□ 0.3
SIN3B-201ENST00000248054 SSU72P8A0A1W2PR75 194 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms