RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CENPFP49454 3210 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 KRIT1O00522 736 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 MSH4O15457 936 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 TMEM253P0C7T8 217 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 ALAS1P13196 640 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 MMP13P45452 471 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 DRG2P55039 364 aaKnown RBP12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 ARHGAP4P98171 946 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 IFT88Q13099 833 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 XRCC4Q13426 336 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 CPXCR1Q8N123 301 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 JPH2Q9BR39 696 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 SLC40A1Q9NP59 571 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 GCNT4Q9P109 453 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 TMEM110-MUSTN1A8MSY1 372 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 FLOT1O75955 427 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 ABCB4P21439 1286 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 HPDP32754 393 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 ZNF131P52739 623 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 C1orf186Q6ZWK4 172 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 PIGWQ7Z7B1 504 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 TRIM51Q9BSJ1 452 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 POLR3CQ9BUI4 534 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 PPANQ9NQ55 473 aaKnown RBP12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
SEC61A1-201ENST00000243253 ZBTB39O15060 712 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 PPIP5K2O43314 1243 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 AP3B2Q13367 1082 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 MAATS1Q7Z4T9 603 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 FUKQ8N0W3 1084 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 CCDC134Q9H6E4 229 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 CD248Q9HCU0 757 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 KLC4Q9NSK0 619 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 KIAA0391O15091 583 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 EIF3DO15371 548 aaKnown RBP eCLIP12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 CAND2O75155 1236 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 ATP2C2O75185 946 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 CYP3A4P08684 503 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 KCNA4P22459 653 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 SOX5P35711 763 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 COG2Q14746 738 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 RINT1Q6NUQ1 792 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 PEX26Q7Z412 305 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 CD101Q93033 1021 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 STK33Q9BYT3 514 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 CARD9Q9H257 536 aa12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 TDRD3Q9H7E2 651 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-201ENST00000243253 CTNNA2P26232 953 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 CHRNA5P30532 468 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 MAGOHP61326 146 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 KIF22Q14807 665 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 SIX1Q15475 284 aaPredicted RBP12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 IFI16Q16666 785 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 CDC42EP5Q6NZY7 148 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 B3GNT9Q6UX72 402 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 UHMK1Q8TAS1 419 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 MAGEC3Q8TD91 643 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 MAGOHBQ96A72 148 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 RGL1Q9NZL6 768 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 WRAP73Q9P2S5 460 aaPredicted RBP12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 NOVA2Q9UNW9 492 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 H2AFZP0C0S5 128 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 PEX5P50542 639 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 MTMR3Q13615 1198 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 H2AFVQ71UI9 128 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 TPH2Q8IWU9 490 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 RFFLQ8WZ73 363 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 PGM2Q96G03 612 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 METTL14Q9HCE5 456 aaKnown RBP12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 SLC12A4Q9UP95 1085 aa12.96□□□□□ -0.33
SEC61A1-201ENST00000243253 BACH1O14867 736 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 CALUO43852 315 aaPredicted RBP12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 MGRN1O60291 552 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 OAS1P00973 400 aaKnown RBP12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 FGGP02679 453 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 PHLDB3Q6NSJ2 640 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 TATDN1Q6P1N9 297 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 TTC27Q6P3X3 843 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 RUFY4Q6ZNE9 571 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 PHLDB2Q86SQ0 1253 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 DAAM2Q86T65 1068 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 GLYCTKQ8IVS8 523 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 SYCE1Q8N0S2 351 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 TAF4BQ92750 862 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 ERP44Q9BS26 406 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 FAM129AQ9BZQ8 928 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 FAM114A2Q9NRY5 505 aa12.96□□□□□ -0.34
SEC61A1-201ENST00000243253 C21orf2O43822 256 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 ADRA2BP18089 450 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 COPB2P35606 906 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 SCTRP47872 440 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 VPS72Q15906 364 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 PREPLQ4J6C6 727 aaPredicted RBP12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 AADACL2Q6P093 401 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 MICALCLQ6ZW33 695 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 ARFGAP2Q8N6H7 521 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 PSMD1Q99460 953 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms