RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CCND1P24385 295 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 TGFB2P61812 414 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 TTLL4Q14679 1199 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 CLEC10AQ8IUN9 316 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 MB21D1Q8N884 522 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 GBP7Q8N8V2 638 aaPredicted RBP11.81□□□□□ -0.52
COPA-201ENST00000241704 MMP19Q99542 508 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 PIK3C2AO00443 1686 aa11.81□□□□□ -0.52
COPA-201ENST00000241704 A0A1W2PRG0 241 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 TTC36A6NLP5 189 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 HGSO14964 777 aaPredicted RBP11.8□□□□□ -0.52
COPA-201ENST00000241704 EVI5O60447 810 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 ATP6V1G2O95670 118 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 TFRCP02786 760 aaKnown RBP11.8□□□□□ -0.52
COPA-201ENST00000241704 PECAM1P16284 738 aaPredicted RBP11.8□□□□□ -0.52
COPA-201ENST00000241704 PAPOLAP51003 745 aaKnown RBP11.8□□□□□ -0.52
COPA-201ENST00000241704 SNAPC2Q13487 334 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 C6orf163Q5TEZ5 329 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 FBXL16Q8N461 479 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 PIGOQ8TEQ8 1089 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 DEFB129Q9H1M3 183 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 KCNH4Q9UQ05 1017 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 FOXN1O15353 648 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 MOCS3O95396 460 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 SRGAP2CP0DJJ0 459 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 ALDH3A1P30838 453 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 CATSPER4Q7RTX7 472 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 TMEM139Q8IV31 216 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 CHMP6Q96FZ7 201 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 RPAP3Q9H6T3 665 aaPredicted RBP11.8□□□□□ -0.52
COPA-201ENST00000241704 MYOZ2Q9NPC6 264 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 TRIM10Q9UDY6 481 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 TTLL3Q9Y4R7 772 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.8□□□□□ -0.52
COPA-201ENST00000241704 ATP2A2P16615 1042 aaKnown RBP11.8□□□□□ -0.52
COPA-201ENST00000241704 PDE6CP51160 858 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 CYP27A1Q02318 531 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 MTMR2Q13614 643 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 DAAM2Q86T65 1068 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 CCDC25Q86WR0 208 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 PROM2Q8N271 834 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 NEK9Q8TD19 979 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 STMN2Q93045 179 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 NT5C1BQ96P26 610 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 KLHL14Q9P2G3 628 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 SNX12Q9UMY4 172 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 POTECB2RU33 542 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 NDC80O14777 642 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 GYPCP04921 128 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 MAP7Q14244 749 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 COG2Q14746 738 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 ANKRD20A8PQ5CZ79 823 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 DENND2CQ68D51 928 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 LDHDQ86WU2 507 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 MAGEC3Q8TD91 643 aa11.8□□□□□ -0.52
COPA-201ENST00000241704 PAPOLBQ9NRJ5 636 aaKnown RBP11.8□□□□□ -0.52
COPA-201ENST00000241704 BUB1O43683 1085 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 STK10O94804 968 aaKnown RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 IL1R1P14778 569 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 MFAP3P55082 362 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 ADGRA1Q86SQ6 560 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 GIMAP8Q8ND71 665 aaPredicted RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 AGBL3Q8NEM8 1001 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 ZMYND12Q9H0C1 365 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 C15orf41Q9Y2V0 281 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 KLHL33A6NCF5 533 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 ZBBXA8MT70 800 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 WDR64B1ANS9 1081 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 STAMBPO95630 424 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 ATP5DP30049 168 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 PAPD7Q5XG87 772 aaKnown RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 APLFQ8IW19 511 aaPredicted RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 SCAF8Q9UPN6 1271 aaKnown RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 RASSF2P50749 326 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 BPIFB4P59827 614 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 KRT76Q01546 638 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 METTL23Q86XA0 190 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 AENQ8WTP8 325 aaKnown RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 STAMBPL1Q96FJ0 436 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 PARK7Q99497 189 aaKnown RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 CHP1Q99653 195 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 ELAC2Q9BQ52 826 aaKnown RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 RTFDC1Q9BY42 306 aaPredicted RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 PCIF1Q9H4Z3 704 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 ARHGEF37A1IGU5 675 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 TRIM49BA6NDI0 452 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 TFAMQ00059 246 aaKnown RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 MFN1Q8IWA4 741 aa11.79□□□□□ -0.52
COPA-201ENST00000241704 GUF1Q8N442 669 aaKnown RBP11.79□□□□□ -0.52
COPA-201ENST00000241704 NRXN3Q9Y4C0 1643 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 CCT8L1PA6NM43 557 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 EIF4E1BA6NMX2 242 aaKnown RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 LGALS16A8MUM7 142 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 RASSF7Q02833 373 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms