RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MARCH10Q8NA82 808 aaPredicted RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 FANCBQ8NB91 859 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 MICAL1Q8TDZ2 1067 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 KLHL6Q8WZ60 621 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 ANKRD7Q92527 254 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 SGSM3Q96HU1 749 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 UBAC1Q9BSL1 405 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 BSDC1Q9NW68 430 aaPredicted RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 COL5A3P25940 1745 aaPredicted RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 LTBP4Q8N2S1 1624 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 MYH14Q7Z406 1995 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 FAM155AB1AL88 458 aaPredicted RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 MSTNO14793 375 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CCP110O43303 1012 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CALM1P0DP23 149 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CALM2P0DP24 149 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CALM3P0DP25 149 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 RXRAP19793 462 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 SEC23AQ15436 765 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 SV2CQ496J9 727 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CAVIN4Q5BKX8 364 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 NT5DC1Q5TFE4 455 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 TDRD10Q5VZ19 366 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 POMZP3Q6PJE2 187 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 OLFM4Q6UX06 510 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 FILIP1Q7Z7B0 1213 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CCAR2Q8N163 923 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CCDC112Q8NEF3 446 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CCDC34Q96HJ3 373 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 C16orf45Q96MC5 204 aaPredicted RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CCDC94Q9BW85 323 aaPredicted RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 XPO4Q9C0E2 1151 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 MKNK2Q9HBH9 465 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 RBM28Q9NW13 759 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 A0A1B0GUL6 1792 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 CNTNAP4Q9C0A0 1308 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 NOP56O00567 594 aaKnown RBP8.9□□□□□ -0.98
CXCR4-201ENST00000241393 PRKAB2O43741 272 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 LEFTY1O75610 366 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 SMC2O95347 1197 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 FSTP19883 344 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 SFPQP23246 707 aaKnown RBP eCLIP8.9□□□□□ -0.98
CXCR4-201ENST00000241393 PTPN14Q15678 1187 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 NBPF9Q3BBW0 867 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 MFSD4AQ8N468 514 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 CNNM3Q8NE01 707 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 RIN3Q8TB24 985 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 ERCC4Q92889 916 aaPredicted RBP8.9□□□□□ -0.98
CXCR4-201ENST00000241393 RIOK1Q9BRS2 568 aaKnown RBP8.9□□□□□ -0.98
CXCR4-201ENST00000241393 MYL10Q9BUA6 226 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 IFNKQ9P0W0 207 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 FBXO2Q9UK22 296 aaPredicted RBP8.9□□□□□ -0.98
CXCR4-201ENST00000241393 SUGT1Q9Y2Z0 365 aa8.9□□□□□ -0.98
CXCR4-201ENST00000241393 SRPRBQ9Y5M8 271 aaKnown RBP8.9□□□□□ -0.98
CXCR4-201ENST00000241393 CACNA1SQ13698 1873 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 DUOX1Q9NRD9 1551 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 A0A087WWV3 80 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 BTBD18B2RXH4 712 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 SNAP23O00161 211 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 PRPF3O43395 683 aaKnown RBP8.89□□□□□ -0.99
CXCR4-201ENST00000241393 CBX7O95931 251 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 TOB1P50616 345 aaPredicted RBP8.89□□□□□ -0.99
CXCR4-201ENST00000241393 AKAP17AQ02040 695 aaKnown RBP8.89□□□□□ -0.99
CXCR4-201ENST00000241393 CLEC16AQ2KHT3 1053 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 RRP12Q5JTH9 1297 aaKnown RBP8.89□□□□□ -0.99
CXCR4-201ENST00000241393 PPFIBP1Q86W92 1011 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 STK11IPQ8N1F8 1099 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 MLKLQ8NB16 471 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 ENOX1Q8TC92 643 aaKnown RBP8.89□□□□□ -0.99
CXCR4-201ENST00000241393 GATA6Q92908 595 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 DNAJC7Q99615 494 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 TRIT1Q9H3H1 467 aaKnown RBP8.89□□□□□ -0.99
CXCR4-201ENST00000241393 INCENPQ9NQS7 918 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 TOMM22Q9NS69 142 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 FAM86C1Q9NVL1 165 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 RAI14Q9P0K7 980 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 SF3B6Q9Y3B4 125 aaKnown RBP8.89□□□□□ -0.99
CXCR4-201ENST00000241393 SCN7AQ01118 1682 aa8.89□□□□□ -0.99
CXCR4-201ENST00000241393 TNKSO95271 1327 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 C9IYK1 514 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 BIN1O00499 593 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 ORC4O43929 436 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 ZNF865P0CJ78 1059 aaPredicted RBP8.88□□□□□ -0.99
CXCR4-201ENST00000241393 SARSP49591 514 aaKnown RBP8.88□□□□□ -0.99
CXCR4-201ENST00000241393 LONRF3Q496Y0 759 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 TMC6Q7Z403 805 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 CATIPQ7Z7H3 387 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 IQCA1Q86XH1 822 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 MIGA1Q8NAN2 632 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 KIF18AQ8NI77 898 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 VWCEQ96DN2 955 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 CLIC6Q96NY7 704 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 NYXQ9GZU5 481 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 KLHL25Q9H0H3 589 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 HSD3B7Q9H2F3 369 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 LEMD3Q9Y2U8 911 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 PCDHA5Q9Y5H7 936 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 COL1A1P02452 1464 aaPredicted RBP8.88□□□□□ -0.99
CXCR4-201ENST00000241393 FAM221BA6H8Z2 402 aa8.88□□□□□ -0.99
CXCR4-201ENST00000241393 WDR64B1ANS9 1081 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms