RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
MSH2-201ENST00000233146 NKRFO15226 690 aaKnown RBP eCLIP14□□□□□ -0.17
MSH2-201ENST00000233146 PIM1P11309 404 aaPredicted RBP14□□□□□ -0.17
MSH2-201ENST00000233146 GRIA2P42262 883 aa14□□□□□ -0.17
MSH2-201ENST00000233146 HALP42357 657 aa14□□□□□ -0.17
MSH2-201ENST00000233146 SERPINB8P50452 374 aa14□□□□□ -0.17
MSH2-201ENST00000233146 IGDCC4Q8TDY8 1250 aa14□□□□□ -0.17
MSH2-201ENST00000233146 DGCR14Q96DF8 476 aaKnown RBP14□□□□□ -0.17
MSH2-201ENST00000233146 CLIC5Q9NZA1 410 aa14□□□□□ -0.17
MSH2-201ENST00000233146 CEP126Q9P2H0 1117 aa14□□□□□ -0.17
MSH2-201ENST00000233146 DYNC1LI1Q9Y6G9 523 aaKnown RBP14□□□□□ -0.17
MSH2-201ENST00000233146 NPHP3-ACAD11A0A0J9YXS1 232 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 RASGRF2O14827 1237 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 BMP15O95972 392 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 DCTN2Q13561 401 aaKnown RBP13.99□□□□□ -0.17
MSH2-201ENST00000233146 ITGA7Q13683 1181 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 EAPPQ56P03 285 aaPredicted RBP13.99□□□□□ -0.17
MSH2-201ENST00000233146 PDXDC1Q6P996 788 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 RASGEF1CQ8N431 466 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 HEY1Q9Y5J3 304 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 USP31Q70CQ4 1352 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 PIK3C2AO00443 1686 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 STRNO43815 780 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 GNAT2P19087 354 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 SLCO1A2P46721 670 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 MAP3K10Q02779 954 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 PROSER3Q2NL68 480 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 SPDYAQ5MJ70 313 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 DUPD1Q68J44 220 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 CCDC65Q8IXS2 484 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 FNDC8Q8TC99 324 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 EEF2KMTQ96G04 330 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 TRIM51Q9BSJ1 452 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 RPTORQ8N122 1335 aa13.99□□□□□ -0.17
MSH2-201ENST00000233146 TMEM110-MUSTN1A8MSY1 372 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 DDX3XO00571 662 aaKnown RBP eCLIP13.98□□□□□ -0.173e-14■□□□□ 9.2
MSH2-201ENST00000233146 MAPK13O15264 365 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 RNASEH1O60930 286 aaKnown RBP13.98□□□□□ -0.17
MSH2-201ENST00000233146 SERPINB7O75635 380 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 CA8P35219 290 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 SMUG1Q53HV7 270 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 UBAP2Q5T6F2 1119 aaKnown RBP13.98□□□□□ -0.17
MSH2-201ENST00000233146 C16orf87Q6PH81 154 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 B3GNT6Q6ZMB0 384 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 SAMD3Q8N6K7 520 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 METTL13Q8N6R0 699 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 FAM133AQ8N9E0 248 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 MAGEB18Q96M61 343 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 MIPEPQ99797 713 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 TRIM31Q9BZY9 425 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 LY9Q9HBG7 655 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 EIF3FO00303 357 aaPredicted RBP13.98□□□□□ -0.17
MSH2-201ENST00000233146 GTF2H1P32780 548 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 ZNF449Q6P9G9 518 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 SLC2A7Q6PXP3 512 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 TREML1Q86YW5 311 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 GIMAP8Q8ND71 665 aaPredicted RBP13.98□□□□□ -0.17
MSH2-201ENST00000233146 TCHPQ9BT92 498 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 SYNCQ9H7C4 482 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 SYNPO2Q9UMS6 1093 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 KDM3BQ7LBC6 1761 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 OR6B1O95007 311 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 CBX6O95503 412 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 CREB1P16220 341 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 KLHL35Q6PF15 583 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 SATL1Q86VE3 508 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 NEUROD6Q96NK8 337 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 SEMA4AQ9H3S1 761 aa13.98□□□□□ -0.17
MSH2-201ENST00000233146 TDRKHQ9Y2W6 561 aaKnown RBP13.98□□□□□ -0.17
MSH2-201ENST00000233146 ADRM1Q16186 407 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 PDCD4Q53EL6 469 aaKnown RBP13.97□□□□□ -0.17
MSH2-201ENST00000233146 EARS2Q5JPH6 523 aaKnown RBP13.97□□□□□ -0.17
MSH2-201ENST00000233146 CCDC174Q6PII3 467 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 TRIM67Q6ZTA4 783 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 ZBED8Q8IZ13 594 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 GDAP1Q8TB36 358 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 ESR2Q92731 530 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 CADM1Q9BY67 442 aaKnown RBP13.97□□□□□ -0.17
MSH2-201ENST00000233146 MLXIPLQ9NP71 852 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 USP40Q9NVE5 1235 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 VILLO15195 856 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 KCNQ3O43525 872 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 NDUFB5O43674 189 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 KLRC4O43908 158 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 DCTN3O75935 186 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 IGKV5-2P06315 115 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 KCNA4P22459 653 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 ARFIP2P53365 341 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 MPP2Q14168 576 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 ZDHHC24Q6UX98 284 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 TRIM22Q8IYM9 498 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 DTX3LQ8TDB6 740 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 GFM2Q969S9 779 aaKnown RBP13.97□□□□□ -0.17
MSH2-201ENST00000233146 PITPNM3Q9BZ71 974 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 MMRN2Q9H8L6 949 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 SPEF2Q9C093 1822 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 FAM196BA6NMK8 535 aa13.97□□□□□ -0.17
MSH2-201ENST00000233146 BTNL10A8MVZ5 291 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms