RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 GRAMD1AQ96CP6 724 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 ADAM22Q9P0K1 906 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 NEXMIFQ5QGS0 1516 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 IL1RL1Q01638 556 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 TRADDQ15628 312 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 KNOP1Q1ED39 458 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 RASIP1Q5U651 963 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 KRT80Q6KB66 452 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 CEP19Q96LK0 163 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 MMTAG2Q9BU76 263 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 ANTXR1Q9H6X2 564 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 YY1AP1Q9H869 796 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 ZWILCHQ9H900 591 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SAMSN1Q9NSI8 373 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 BARHL2Q9NY43 387 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 CNOT8Q9UFF9 292 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 HERC5Q9UII4 1024 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 PCDHB8Q9UN66 801 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 APOBEC2Q9Y235 224 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 STXBP3O00186 592 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 MYO1DO94832 1006 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 CD58P19256 250 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 PEX3P56589 373 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 ROR1Q01973 937 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 CACNB1Q02641 598 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 DMTNQ08495 405 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 NBPF9Q3BBW0 867 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 EFHC2Q5JST6 749 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 UHMK1Q8TAS1 419 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 PIGBQ92521 554 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 DYNLL2Q96FJ2 89 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 PLA2G12BQ9BX93 195 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 PARD6BQ9BYG5 372 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 SAYSD1Q9NPB0 183 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 MAP3K20Q9NYL2 800 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 STX18Q9P2W9 335 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 PLAAQ9Y263 795 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 L3MBTL1Q9Y468 752 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 KRT16P08779 473 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 MCAMP43121 646 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 VAMP7P51809 220 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 KCNB1Q14721 858 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 ZKSCAN8Q15776 578 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 KIF19Q2TAC6 998 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 ZNF568Q3ZCX4 644 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 FASTKD5Q7L8L6 764 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 MB21D2Q8IYB1 491 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 CATSPER1Q8NEC5 780 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 NOVA2Q9UNW9 492 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 CHUKO15111 745 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 FGGP02679 453 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 RALAP11233 206 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 NR5A1Q13285 461 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 CASP8Q14790 479 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 SNX17Q15036 470 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 BBS9Q3SYG4 887 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 SCARA5Q6ZMJ2 495 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 SMYD4Q8IYR2 804 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 C7orf31Q8N865 590 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 ACAD9Q9H845 621 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 KLHL8Q9P2G9 620 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 ABCA6Q8N139 1617 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 HNRNPCL2B2RXH8 293 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 SMAPO00193 183 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 FAM83BQ5T0W9 1011 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 TMTC4Q5T4D3 741 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 KCTD16Q68DU8 428 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 SFR1Q86XK3 245 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 ZNF564Q8TBZ8 553 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 SNX19Q92543 992 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 IRAK4Q9NWZ3 460 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 FARP1Q9Y4F1 1045 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 FRMPD1Q5SYB0 1578 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 GOLGA8TH3BQL2 631 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 EFCAB14O75071 495 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 PALMO75781 387 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 PLEKHA8P1O95397 391 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 EIF2AK2P19525 551 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 NCF2P19878 526 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 SDC4P31431 198 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 NNMTP40261 264 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 QARSP47897 775 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 PMS2P54278 862 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 PTPROQ16827 1216 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 RWDD4Q6NW29 188 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 SP8Q8IXZ3 490 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 TBC1D19Q8N5T2 526 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 ANKRD13CQ8N6S4 541 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 MAML1Q92585 1016 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 FGD4Q96M96 766 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPS1-201ENST00000233072 POLR3FQ9H1D9 316 aaPredicted RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 BHMT2Q9H2M3 363 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 PARVAQ9NVD7 372 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 NSMCE4AQ9NXX6 385 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 EHD2Q9NZN4 543 aa7.69□□□□□ -1.18
CPS1-201ENST00000233072 TPX2Q9ULW0 747 aaKnown RBP7.69□□□□□ -1.18
CPS1-201ENST00000233072 PDS5AQ29RF7 1337 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms