RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TMEM88BA6NKF7 163 aa9□□□□□ -0.97
SPARC-201ENST00000231061 MYO1FO00160 1098 aa9□□□□□ -0.97
SPARC-201ENST00000231061 IKBKBO14920 756 aa9□□□□□ -0.97
SPARC-201ENST00000231061 PPP6R2O75170 966 aa9□□□□□ -0.97
SPARC-201ENST00000231061 PHEXP78562 749 aa9□□□□□ -0.97
SPARC-201ENST00000231061 TJAP1Q5JTD0 557 aa9□□□□□ -0.97
SPARC-201ENST00000231061 PPP1R15BQ5SWA1 713 aa9□□□□□ -0.97
SPARC-201ENST00000231061 CCDC25Q86WR0 208 aa9□□□□□ -0.97
SPARC-201ENST00000231061 TRIM22Q8IYM9 498 aa9□□□□□ -0.97
SPARC-201ENST00000231061 IFNL3Q8IZI9 196 aa9□□□□□ -0.97
SPARC-201ENST00000231061 CPXCR1Q8N123 301 aa9□□□□□ -0.97
SPARC-201ENST00000231061 MAML3Q96JK9 1138 aa9□□□□□ -0.97
SPARC-201ENST00000231061 HNRNPABQ99729 332 aaKnown RBP9□□□□□ -0.97
SPARC-201ENST00000231061 SELENOOQ9BVL4 669 aa9□□□□□ -0.97
SPARC-201ENST00000231061 TRIM8Q9BZR9 551 aa9□□□□□ -0.97
SPARC-201ENST00000231061 ZWILCHQ9H900 591 aa9□□□□□ -0.97
SPARC-201ENST00000231061 LY9Q9HBG7 655 aa9□□□□□ -0.97
SPARC-201ENST00000231061 HMGXB4Q9UGU5 601 aa9□□□□□ -0.97
SPARC-201ENST00000231061 DDX20Q9UHI6 824 aaKnown RBP9□□□□□ -0.97
SPARC-201ENST00000231061 DPP7Q9UHL4 492 aa9□□□□□ -0.97
SPARC-201ENST00000231061 A8MX80 341 aa9□□□□□ -0.97
SPARC-201ENST00000231061 LACTBL1A8MY62 500 aa9□□□□□ -0.97
SPARC-201ENST00000231061 BTBD18B2RXH4 712 aa9□□□□□ -0.97
SPARC-201ENST00000231061 B4DLN1 442 aa9□□□□□ -0.97
SPARC-201ENST00000231061 TMEM232C9JQI7 657 aa9□□□□□ -0.97
SPARC-201ENST00000231061 FOXN1O15353 648 aa9□□□□□ -0.97
SPARC-201ENST00000231061 CUTAO60888 179 aa9□□□□□ -0.97
SPARC-201ENST00000231061 TMCC1O94876 653 aa9□□□□□ -0.97
SPARC-201ENST00000231061 CDK4P11802 303 aa9□□□□□ -0.97
SPARC-201ENST00000231061 SLC5A1P13866 664 aa9□□□□□ -0.97
SPARC-201ENST00000231061 PPP1R7Q15435 360 aa9□□□□□ -0.97
SPARC-201ENST00000231061 C15orf59Q2T9L4 293 aaPredicted RBP9□□□□□ -0.97
SPARC-201ENST00000231061 PPP4R3AQ6IN85 833 aa9□□□□□ -0.97
SPARC-201ENST00000231061 PPFIBP2Q8ND30 876 aa9□□□□□ -0.97
SPARC-201ENST00000231061 OSCP1Q8WVF1 389 aa9□□□□□ -0.97
SPARC-201ENST00000231061 FATE1Q969F0 183 aa9□□□□□ -0.97
SPARC-201ENST00000231061 CEP95Q96GE4 821 aa9□□□□□ -0.97
SPARC-201ENST00000231061 RPGRIP1Q96KN7 1286 aa9□□□□□ -0.97
SPARC-201ENST00000231061 STRBPQ96SI9 672 aaKnown RBP9□□□□□ -0.97
SPARC-201ENST00000231061 MPHOSPH8Q99549 860 aa9□□□□□ -0.97
SPARC-201ENST00000231061 BATF3Q9NR55 127 aa9□□□□□ -0.97
SPARC-201ENST00000231061 FANCLQ9NW38 375 aa9□□□□□ -0.97
SPARC-201ENST00000231061 UBN2Q6ZU65 1347 aa9□□□□□ -0.97
SPARC-201ENST00000231061 MYH15Q9Y2K3 1946 aa9□□□□□ -0.97
SPARC-201ENST00000231061 ADAMTSL3P82987 1691 aa9□□□□□ -0.97
SPARC-201ENST00000231061 SNPHO15079 494 aa9□□□□□ -0.97
SPARC-201ENST00000231061 RASGRP1O95267 797 aa9□□□□□ -0.97
SPARC-201ENST00000231061 PTGS2P35354 604 aa9□□□□□ -0.97
SPARC-201ENST00000231061 SOX5P35711 763 aa9□□□□□ -0.97
SPARC-201ENST00000231061 MAP3K9P80192 1104 aa9□□□□□ -0.97
SPARC-201ENST00000231061 PUM3Q15397 648 aaKnown RBP9□□□□□ -0.97
SPARC-201ENST00000231061 RTN1Q16799 776 aa9□□□□□ -0.97
SPARC-201ENST00000231061 WHAMMP3Q1A5X7 153 aa9□□□□□ -0.97
SPARC-201ENST00000231061 ERCC6LQ2NKX8 1250 aa9□□□□□ -0.97
SPARC-201ENST00000231061 P3H1Q32P28 736 aa9□□□□□ -0.97
SPARC-201ENST00000231061 ANKDD1AQ495B1 522 aa9□□□□□ -0.97
SPARC-201ENST00000231061 WLSQ5T9L3 541 aa9□□□□□ -0.97
SPARC-201ENST00000231061 RESP18Q5W5W9 173 aa9□□□□□ -0.97
SPARC-201ENST00000231061 RAPH1Q70E73 1250 aa9□□□□□ -0.97
SPARC-201ENST00000231061 DIS3L2Q8IYB7 885 aaKnown RBP9□□□□□ -0.97
SPARC-201ENST00000231061 PIP4K2CQ8TBX8 421 aa9□□□□□ -0.97
SPARC-201ENST00000231061 SNX25Q9H3E2 840 aa9□□□□□ -0.97
SPARC-201ENST00000231061 EHMT1Q9H9B1 1298 aa9□□□□□ -0.97
SPARC-201ENST00000231061 HERC5Q9UII4 1024 aaKnown RBP9□□□□□ -0.97
SPARC-201ENST00000231061 PCDHA5Q9Y5H7 936 aa9□□□□□ -0.97
SPARC-201ENST00000231061 GAKO14976 1311 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 SPEF2Q9C093 1822 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 PSDA5PKW4 1024 aaPredicted RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 PRKAB2O43741 272 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 PDE8AO60658 829 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 URI1O94763 535 aaPredicted RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 TMEM11P17152 192 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 EPS15P42566 896 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 MLLT3P42568 568 aaPredicted RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 PLOD1Q02809 727 aaPredicted RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 PTPAQ15257 358 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 ZNF827Q17R98 1081 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 SLC44A4Q53GD3 710 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 LVRNQ6Q4G3 990 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 METTL16Q86W50 562 aaKnown RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 SYT2Q8N9I0 419 aaPredicted RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 WASF1Q92558 559 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 PLVAPQ9BX97 442 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 MRPL9Q9BYD2 267 aaKnown RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 ZSWIM5Q9P217 1185 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 TTC7AQ9ULT0 858 aaPredicted RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 MYPNQ86TC9 1320 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 NUP188Q5SRE5 1749 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 COL5A2P05997 1499 aaPredicted RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 CDHR2Q9BYE9 1310 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 ALDH3A1P30838 453 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 BLVRAP53004 296 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 GRAMD4Q6IC98 578 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 TRMT44Q8IYL2 757 aaKnown RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 GALNT15Q8N3T1 639 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 TRIM58Q8NG06 486 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 IGDCC4Q8TDY8 1250 aa8.99□□□□□ -0.97
SPARC-201ENST00000231061 SMAD5Q99717 465 aaKnown RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 MRPL40Q9NQ50 206 aaKnown RBP8.99□□□□□ -0.97
SPARC-201ENST00000231061 SMYD2Q9NRG4 433 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms