RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 CXCR5P32302 372 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 PRKCEQ02156 737 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 CYP27A1Q02318 531 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 TTLL4Q14679 1199 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 KRT31Q15323 416 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 CCDC60Q8IWA6 550 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 TEX2Q8IWB9 1127 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 PANX2Q96RD6 677 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 DUSP10Q9Y6W6 482 aa12.79□□□□□ -0.36
TNFAIP1-201ENST00000226225 GOLGA6CA6NDK9 693 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 ASB14A6NK59 587 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 GOLGA6DP0CG33 693 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 TRIM21P19474 475 aaKnown RBP12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 UBA1P22314 1058 aaKnown RBP12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 NR2F2P24468 414 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 CORO7P57737 925 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 ARMCX2Q7L311 632 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 NIPA1Q7RTP0 329 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 SLC5A4Q9NY91 659 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 GOLGA6AQ9NYA3 693 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 MANSC4A6NHS7 340 aaPredicted RBP12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 CETN3O15182 167 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 CNMDO75829 334 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 SYF2O95926 243 aaKnown RBP12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 TCF7P36402 384 aaPredicted RBP12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 STAT5BP51692 787 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 SMTNP53814 917 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 PRAMEF19Q5SWL8 479 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 TUBGCP2Q9BSJ2 902 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 KIFC3Q9BVG8 833 aa12.78□□□□□ -0.36
TNFAIP1-201ENST00000226225 IGF2BP3O00425 579 aaKnown RBP eCLIP12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 SLC16A4O15374 487 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 PPP1R2P41236 205 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 PSMD2Q13200 908 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 ZNF746Q6NUN9 644 aaPredicted RBP12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 ANKRD23Q86SG2 305 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 TADA2BQ86TJ2 420 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 CNGA4Q8IV77 575 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 FAM133AQ8N9E0 248 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 MSANTD4Q8NCY6 345 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 FAM76AQ8TAV0 307 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 NEK9Q8TD19 979 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 SLC7A3Q8WY07 619 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 PCIF1Q9H4Z3 704 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 ZFYVE28Q9HCC9 887 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 RAB21Q9UL25 225 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 LRRIQ4A6NIV6 560 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 PPFIA4O75335 1185 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 CASP5P51878 434 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 COPB1P53618 953 aaKnown RBP12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 GNGT1P63211 74 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 KCNA1Q09470 495 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 GUF1Q8N442 669 aaKnown RBP12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 PPP1R13LQ8WUF5 828 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 TCHPQ9BT92 498 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 SEMA6BQ9H3T3 888 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 ABHD10Q9NUJ1 306 aa12.77□□□□□ -0.36
TNFAIP1-201ENST00000226225 SPATA31C2B4DYI2 1134 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 EBAG9O00559 213 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 KCNA2P16389 499 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 RARRES1P49788 294 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 SEMA3FQ13275 785 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 HNRNPLLQ8WVV9 542 aaKnown RBP12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 SEPT1Q8WYJ6 367 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 TMEM143Q96AN5 459 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 IFT74Q96LB3 600 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 IKZF4Q9H2S9 585 aa12.77□□□□□ -0.37
TNFAIP1-201ENST00000226225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.77□□□□□ -0.375e-30■■■■■ 372.6
TNFAIP1-201ENST00000226225 MYCP01106 439 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 RNASE9P60153 205 aaKnown RBP12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 MOGSQ13724 837 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 HSDL1Q3SXM5 330 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 GTF3C2Q8WUA4 911 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 ZIC5Q96T25 663 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 NRBP2Q9NSY0 501 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 EHD2Q9NZN4 543 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 GREB1LQ9C091 1923 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 GOLGA6BA6NDN3 693 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 STAM2O75886 525 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 ADCYAP1R1P41586 468 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 DMP1Q13316 513 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 MAP9Q49MG5 647 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 HYIQ5T013 277 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 TMEM63BQ5T3F8 832 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 RNF187Q5TA31 235 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 FAM160B1Q5W0V3 765 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 SCFD2Q8WU76 684 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 HPCAL4Q9UM19 191 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 FAM169AQ9Y6X4 670 aa12.76□□□□□ -0.37
TNFAIP1-201ENST00000226225 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms