RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 EPS8L3Q8TE67 593 aaKnown RBP13.44□□□□□ -0.26
NUP88-201ENST00000225696 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
NUP88-201ENST00000225696 MBOAT7Q96N66 472 aa13.44□□□□□ -0.26
NUP88-201ENST00000225696 PRMT1Q99873 361 aaKnown RBP13.44□□□□□ -0.26
NUP88-201ENST00000225696 PABPC3Q9H361 631 aaKnown RBP13.44□□□□□ -0.26
NUP88-201ENST00000225696 SEPT11Q9NVA2 429 aaKnown RBP13.44□□□□□ -0.26
NUP88-201ENST00000225696 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
NUP88-201ENST00000225696 KIF13BQ9NQT8 1826 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 CCT8L1PA6NM43 557 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 FERP16591 822 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 VCAM1P19320 739 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 FGFR4P22455 802 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 RPL21P46778 160 aaKnown RBP13.43□□□□□ -0.26
NUP88-201ENST00000225696 IFNAR2P48551 515 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 NEDD9Q14511 834 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 LLGL1Q15334 1064 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 ARHGAP44Q17R89 818 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 ACCSLQ4AC99 568 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 KIAA1755Q5JYT7 1200 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 C15orf52Q6ZUT6 534 aaKnown RBP13.43□□□□□ -0.26
NUP88-201ENST00000225696 DHX37Q8IY37 1157 aaKnown RBP13.43□□□□□ -0.26
NUP88-201ENST00000225696 SLC20A1Q8WUM9 679 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 N4BP2L2Q92802 583 aaPredicted RBP13.43□□□□□ -0.26
NUP88-201ENST00000225696 KDM4CQ9H3R0 1056 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 INTUQ9ULD6 942 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 ODF2LQ9ULJ1 636 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 NCANO14594 1321 aa13.43□□□□□ -0.26
NUP88-201ENST00000225696 MGRN1O60291 552 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 NUDT17P0C025 328 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 TMEM253P0C7T8 217 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 KRT13P13646 458 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 SCP2P22307 547 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 HOXA13P31271 388 aaPredicted RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 PTGIRP43119 386 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 SCNN1DP51172 638 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 CTTNQ14247 550 aaKnown RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 BMT2Q1RMZ1 405 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 USH1GQ495M9 461 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 HIBCHQ6NVY1 386 aaPredicted RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 PIGWQ7Z7B1 504 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 FAM186BQ8IYM0 893 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 CERS5Q8N5B7 392 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 PRELID2Q8N945 189 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 NEK9Q8TD19 979 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 TBC1D31Q96DN5 1066 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 ELAC2Q9BQ52 826 aaKnown RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 DBR1Q9UK59 544 aaKnown RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 AGAP1Q9UPQ3 857 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 MSH4O15457 936 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 ELF1P32519 619 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 HSPA1LP34931 641 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 FMO5P49326 533 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 NFIAQ12857 509 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 MAPK7Q13164 816 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 PPP1R7Q15435 360 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 FAM133BQ5BKY9 247 aaKnown RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 GPATCH4Q5T3I0 446 aaKnown RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 PHLDB3Q6NSJ2 640 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 SLFN12Q8IYM2 578 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 RDH13Q8NBN7 331 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 CCDC197Q8NCU1 140 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 CTNNBL1Q8WYA6 563 aaPredicted RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 STK33Q9BYT3 514 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 RAB17Q9H0T7 212 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 DNAJC18Q9H819 358 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 CNOT10Q9H9A5 744 aaKnown RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 METTL14Q9HCE5 456 aaKnown RBP13.42□□□□□ -0.26
NUP88-201ENST00000225696 ABCF3Q9NUQ8 709 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 GGA1Q9UJY5 639 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 VAV3Q9UKW4 847 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 PCDHA3Q9Y5H8 950 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 ALG6Q9Y672 507 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 SMCHD1A6NHR9 2005 aa13.42□□□□□ -0.26
NUP88-201ENST00000225696 TMEM110-MUSTN1A8MSY1 372 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 FOXN3O00409 490 aaPredicted RBP13.41□□□□□ -0.26
NUP88-201ENST00000225696 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 SLC16A3O15427 465 aaKnown RBP13.41□□□□□ -0.26
NUP88-201ENST00000225696 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
NUP88-201ENST00000225696 DNAJC8O75937 253 aaPredicted RBP13.41□□□□□ -0.26
NUP88-201ENST00000225696 CREB1P16220 341 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 RPL13P26373 211 aaKnown RBP13.41□□□□□ -0.26
NUP88-201ENST00000225696 CYP2J2P51589 502 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 EIF3BP55884 814 aaKnown RBP13.41□□□□□ -0.26
NUP88-201ENST00000225696 DENND2CQ68D51 928 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 RINT1Q6NUQ1 792 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 GIMAP7Q8NHV1 300 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 TBC1D16Q8TBP0 767 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 CENPTQ96BT3 561 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 POP1Q99575 1024 aaKnown RBP13.41□□□□□ -0.26
NUP88-201ENST00000225696 CARD9Q9H257 536 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.41□□□□□ -0.261e-8■■■■■ 38.5
NUP88-201ENST00000225696 SUFUQ9UMX1 484 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 C21orf2O43822 256 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 ATP6V1G2O95670 118 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 RPSAP08865 295 aaKnown RBP13.41□□□□□ -0.26
NUP88-201ENST00000225696 ANXA13P27216 316 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 CACNB3P54284 484 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 LRRC14Q15048 493 aa13.41□□□□□ -0.26
NUP88-201ENST00000225696 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms