RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 PGK1P00558 417 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 GLRA2P23416 452 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 NCKAP1LP55160 1127 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 RTP1P59025 263 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 LRRC63Q05C16 580 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 DMP1Q13316 513 aaPredicted RBP19.84■□□□□ 0.77
CBX1-201ENST00000225603 ARMCX5Q6P1M9 558 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 LRRC55Q6ZSA7 311 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 TMEM161BQ8NDZ6 487 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 PCDHB13Q9Y5F0 798 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 TGFB1I1O43294 461 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 KIF20AO95235 890 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 HMGCRP04035 888 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 MYL3P08590 195 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 CPT1AP50416 773 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 CHMP4BP1P59074 171 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 SPIRE2Q8WWL2 714 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 NTPCRQ9BSD7 190 aaKnown RBP19.83■□□□□ 0.77
CBX1-201ENST00000225603 C17orf75Q9HAS0 396 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 PPME1Q9Y570 386 aa19.83■□□□□ 0.77
CBX1-201ENST00000225603 C22orf31O95567 290 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 F2P00734 622 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 C6orf222P0C671 652 aaPredicted RBP19.83■□□□□ 0.76
CBX1-201ENST00000225603 ZNF484Q5JVG2 852 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 MAP3K21Q5TCX8 1036 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 CREBRFQ8IUR6 639 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 TSG101Q99816 390 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 BEGAINQ9BUH8 593 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 THAP9Q9H5L6 903 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 KMT5AQ9NQR1 393 aa19.83■□□□□ 0.76
CBX1-201ENST00000225603 KCNJ18B7U540 433 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 SFPQP23246 707 aaKnown RBP eCLIP19.82■□□□□ 0.76
CBX1-201ENST00000225603 GJA9P57773 515 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 GTF2BQ00403 316 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 KCNJ12Q14500 433 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 TCP11X2Q5H9J9 407 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 PXYLP1Q8TE99 480 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 ST6GALNAC4Q9H4F1 302 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 KCND1Q9NSA2 647 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 WBP1LQ9NX94 342 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 TRAF3IP3Q9Y228 551 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 GJB1P08034 283 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 TNNT1P13805 278 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 KRT31Q15323 416 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 PTPN21Q16825 1174 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 KIAA0753Q2KHM9 967 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 FOXR2Q6PJQ5 311 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 PRPF31Q8WWY3 499 aaKnown RBP19.82■□□□□ 0.76
CBX1-201ENST00000225603 IFT74Q96LB3 600 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 INTS13Q9NVM9 706 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 TRIM17Q9Y577 477 aa19.82■□□□□ 0.76
CBX1-201ENST00000225603 USP27XA6NNY8 438 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 PDXKO00764 312 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 RARBP10826 455 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 KLRC1P26715 233 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 CLCN3P51790 818 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 SMTNP53814 917 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 PPFIA1Q13136 1202 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 MARCH8Q5T0T0 291 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 EFCAB12Q6NXP0 572 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 STXBP4Q6ZWJ1 553 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 UPF3AQ9H1J1 476 aaKnown RBP19.81■□□□□ 0.76
CBX1-201ENST00000225603 TYW1Q9NV66 732 aaKnown RBP19.81■□□□□ 0.76
CBX1-201ENST00000225603 SETD4Q9NVD3 440 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 PTCH2Q9Y6C5 1203 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 UBE4BO95155 1302 aa19.81■□□□□ 0.76
CBX1-201ENST00000225603 DENND3A2RUS2 1198 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 TISP43B9A030 160 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 CLIC2O15247 247 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 GRIK4Q16099 956 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 GNASQ5JWF2 1037 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 IER5Q5VY09 327 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 TAS1R3Q7RTX0 852 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 METTL13Q8N6R0 699 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 DNAJC5GQ8N7S2 189 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 NOC3LQ8WTT2 800 aaKnown RBP19.8■□□□□ 0.76
CBX1-201ENST00000225603 LIMA1Q9UHB6 759 aaKnown RBP19.8■□□□□ 0.76
CBX1-201ENST00000225603 HAS3O00219 553 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 RIOK3O14730 519 aaKnown RBP19.8■□□□□ 0.76
CBX1-201ENST00000225603 PURAQ00577 322 aaKnown RBP19.8■□□□□ 0.76
CBX1-201ENST00000225603 FKBP3Q00688 224 aaKnown RBP19.8■□□□□ 0.76
CBX1-201ENST00000225603 CAPSQ13938 189 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 HIC1Q14526 733 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 MFSD10Q14728 455 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 BRDTQ58F21 947 aaPredicted RBP19.8■□□□□ 0.76
CBX1-201ENST00000225603 VSTM4Q8IW00 320 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 ZC3H3Q8IXZ2 948 aaKnown RBP19.8■□□□□ 0.76
CBX1-201ENST00000225603 TAB2Q9NYJ8 693 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 ARHGAP28Q9P2N2 729 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 TBX20Q9UMR3 447 aa19.8■□□□□ 0.76
CBX1-201ENST00000225603 ADAMTS4O75173 837 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 INHAP05111 366 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 SMIM10L2AP0DMW4 78 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 SMIM10L2BP0DMW5 78 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 PSEN2P49810 448 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 RBM10P98175 930 aaKnown RBP19.79■□□□□ 0.76
CBX1-201ENST00000225603 ALCAMQ13740 583 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 ARHGEF6Q15052 776 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 EDRF1Q3B7T1 1238 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 MTHFD1LQ6UB35 978 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms