RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 RHOT2Q8IXI1 618 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 NBPF15Q8N660 670 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 ATP6V0A1Q93050 837 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 ARL8AQ96BM9 186 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 TTC25Q96NG3 672 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 CACYBPQ9HB71 228 aaKnown RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 IGSF1Q8N6C5 1336 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 TOB2Q14106 344 aaPredicted RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 RCSD1Q6JBY9 416 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 PPP1R2P3Q6NXS1 205 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 RAB44Q7Z6P3 723 aaPredicted RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 FAM81BQ96LP2 452 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 SH3GL1Q99961 368 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 NDEL1Q9GZM8 345 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 RMI1Q9H9A7 625 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 TLR7Q9NYK1 1049 aaKnown RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 UBAP1Q9NZ09 502 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 CEP72Q9P209 647 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 SYNMO15061 1565 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 MIF4GDA9UHW6 222 aaKnown RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 H3BRJ5 948 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 WBP4O75554 376 aaKnown RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 PHKA1P46020 1223 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 POLA2Q14181 598 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 MFSD4BQ5TF39 518 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 TRIM59Q8IWR1 403 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 FLCNQ8NFG4 579 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 FAM193BQ96PV7 902 aaPredicted RBP11.13□□□□□ -0.63
VCL-201ENST00000211998 CSRNP1Q96S65 589 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 NPHS2Q9NP85 383 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 WDR17Q8IZU2 1322 aa11.13□□□□□ -0.63
VCL-201ENST00000211998 BBOX1O75936 387 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 CARSP49589 748 aaKnown RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 PRAMEP78395 509 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 NCAPG2Q86XI2 1143 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 MYLK4Q86YV6 388 aaPredicted RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 STAG2Q8N3U4 1231 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 GIPC2Q8TF65 315 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 NMD3Q96D46 503 aaKnown RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 NT5C1BQ96P26 610 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 UBN1Q9NPG3 1134 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 DBR1Q9UK59 544 aaKnown RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 PCDHA4Q9UN74 947 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 ARHGAP26Q9UNA1 814 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 PITPNM2Q9BZ72 1349 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 CLIC2O15247 247 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 GOLGA8HP0CJ92 632 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 CHRNA3P32297 505 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 ARL4CP56559 192 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 COQ7Q99807 217 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 UBE2TQ9NPD8 197 aaPredicted RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 MID2Q9UJV3 735 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 E7ENQ6 273 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 TTLL1O95922 423 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 RFX1P22670 979 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 ALDH18A1P54886 795 aaKnown RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 KCTD2Q14681 263 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 KCNB1Q14721 858 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 NCAPHQ15003 741 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 ARHGEF6Q15052 776 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 KLHL38Q2WGJ6 581 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 DNAL1Q4LDG9 190 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 ACAD11Q709F0 780 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 CATSPER3Q86XQ3 398 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 RASGRP4Q8TDF6 673 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 KLHL25Q9H0H3 589 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 ALG13Q9NP73 1137 aaKnown RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 GJB4Q9NTQ9 266 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 NDUFA13Q9P0J0 144 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 TRIM33Q9UPN9 1127 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 TMEM94Q12767 1356 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 E2F6O75461 281 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 OATP04181 439 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 DSG1Q02413 1049 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 MRPL28Q13084 256 aaKnown RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 C3orf20Q8ND61 904 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 TRIM10Q9UDY6 481 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 SEPT3Q9UH03 358 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 L1RE1Q9UN81 338 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 TPD52L2O43399 206 aaKnown RBP11.12□□□□□ -0.63
VCL-201ENST00000211998 RCN1Q15293 331 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 LZICQ8WZA0 190 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 MTBPQ96DY7 904 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 THTPAQ9BU02 230 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 WDR11Q9BZH6 1224 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 WWP1Q9H0M0 922 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 IL1RAPL1Q9NZN1 696 aa11.12□□□□□ -0.63
VCL-201ENST00000211998 H0Y626 953 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 TRIM16O95361 564 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 LRRC63Q05C16 580 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 TRIM60Q495X7 471 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 ANKARQ7Z5J8 1434 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 GPR162Q16538 588 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 KIF19Q2TAC6 998 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 TMTC4Q5T4D3 741 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 RAD9BQ6WBX8 426 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 FAM196AQ6ZSG2 479 aa11.11□□□□□ -0.63
VCL-201ENST00000211998 GALNT4Q8N4A0 578 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms