RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 PHLDB3Q6NSJ2 640 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 SEPT14Q6ZU15 432 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 ARHGEF19Q8IW93 802 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 SP8Q8IXZ3 490 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 ANKRD42Q8N9B4 389 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.34■□□□□ 0.21
EFNB1-201ENST00000204961 GDF3Q9NR23 364 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
EFNB1-201ENST00000204961 IGKV6D-41A0A0C4DH26 115 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 PPP1R37O75864 691 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 FAM102BQ5T8I3 360 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 ALS2CLQ60I27 953 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 CCDC105Q8IYK2 499 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 IL31RAQ8NI17 732 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 CCDC114Q96M63 670 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 INTS2Q9H0H0 1204 aaKnown RBP16.34■□□□□ 0.21
EFNB1-201ENST00000204961 CD248Q9HCU0 757 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 KLHL11Q9NVR0 708 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 AIPL1Q9NZN9 384 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 USTQ9Y2C2 406 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
EFNB1-201ENST00000204961 EIF4E1BA6NMX2 242 aaKnown RBP16.33■□□□□ 0.2
EFNB1-201ENST00000204961 CAND2O75155 1236 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 PIAS1O75925 651 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 APBA3O96018 575 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 STAT2P52630 851 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 FBXO25Q8TCJ0 367 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 ATG4AQ8WYN0 398 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
EFNB1-201ENST00000204961 CABS1Q96KC9 395 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 PAIP2Q9BPZ3 127 aaKnown RBP16.33■□□□□ 0.2
EFNB1-201ENST00000204961 COG5Q9UP83 839 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 A0A087WUV0 522 aaPredicted RBP16.33■□□□□ 0.2
EFNB1-201ENST00000204961 TESPA1A2RU30 521 aaPredicted RBP16.33■□□□□ 0.2
EFNB1-201ENST00000204961 LCA5LO95447 670 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 VIMP08670 466 aaKnown RBP16.33■□□□□ 0.2
EFNB1-201ENST00000204961 ZNF844Q08AG5 666 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 PASD1Q8IV76 773 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 RPUSD2Q8IZ73 545 aaKnown RBP16.33■□□□□ 0.2
EFNB1-201ENST00000204961 JPH2Q9BR39 696 aaPredicted RBP16.33■□□□□ 0.2
EFNB1-201ENST00000204961 TRIM7Q9C029 511 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 UNC45AQ9H3U1 944 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 SIX2Q9NPC8 291 aa16.33■□□□□ 0.2
EFNB1-201ENST00000204961 FRMD3A2A2Y4 597 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 SGPL1O95470 568 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 MDH1P40925 334 aaKnown RBP16.32■□□□□ 0.2
EFNB1-201ENST00000204961 IFI35P80217 286 aaPredicted RBP16.32■□□□□ 0.2
EFNB1-201ENST00000204961 ZKSCAN8Q15776 578 aaPredicted RBP16.32■□□□□ 0.2
EFNB1-201ENST00000204961 CYP3A4P08684 503 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 MMS22LQ6ZRQ5 1243 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 KIRREL3Q8IZU9 778 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 LBHD1Q9BQE6 289 aaPredicted RBP16.32■□□□□ 0.2
EFNB1-201ENST00000204961 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
EFNB1-201ENST00000204961 KIAA1551Q9HCM1 1747 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 COL16A1Q07092 1604 aaPredicted RBP16.32■□□□□ 0.2
EFNB1-201ENST00000204961 SCN7AQ01118 1682 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 GJB6O95452 261 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 PRLRP16471 622 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 SOX5P35711 763 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 SEZ6Q53EL9 994 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 NT5DC3Q86UY8 548 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 MYCBPAPQ8TBZ2 947 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 TSKSQ9UJT2 592 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 ALG6Q9Y672 507 aa16.32■□□□□ 0.2
EFNB1-201ENST00000204961 IPO5O00410 1097 aaKnown RBP16.31■□□□□ 0.2
EFNB1-201ENST00000204961 NFIBO00712 420 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 PEX10O60683 326 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 CTNND1O60716 968 aaKnown RBP16.31■□□□□ 0.2
EFNB1-201ENST00000204961 POLR2MP0CAP2 368 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 DR1Q01658 176 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 PPP3CAQ08209 521 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 PTGISQ16647 500 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 MYCBPQ99417 103 aaPredicted RBP16.31■□□□□ 0.2
EFNB1-201ENST00000204961 SEMA4AQ9H3S1 761 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 AZI2Q9H6S1 392 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 RAVER2Q9HCJ3 691 aaKnown RBP16.31■□□□□ 0.2
EFNB1-201ENST00000204961 KCNK9Q9NPC2 374 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 AGPAT3Q9NRZ7 376 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 F8VZ95 297 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 PDXKO00764 312 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 FAM133BQ5BKY9 247 aaKnown RBP16.31■□□□□ 0.2
EFNB1-201ENST00000204961 DCAF12L1Q5VU92 463 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 PADI6Q6TGC4 694 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 MIER3Q7Z3K6 550 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 DYDC1Q8WWB3 177 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 FMO2Q99518 471 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 PDGFDQ9GZP0 370 aaPredicted RBP16.31■□□□□ 0.2
EFNB1-201ENST00000204961 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
EFNB1-201ENST00000204961 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
EFNB1-201ENST00000204961 SLC47A2Q86VL8 602 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 CCDC26Q8TAB7 109 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 EPS8L3Q8TE67 593 aaKnown RBP16.3■□□□□ 0.2
EFNB1-201ENST00000204961 CCDC17Q96LX7 622 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 SH3GL2Q99962 352 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 TELO2Q9Y4R8 837 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 EYA4O95677 639 aa16.3■□□□□ 0.2
EFNB1-201ENST00000204961 HNRNPH1P31943 449 aaKnown RBP16.3■□□□□ 0.2
EFNB1-201ENST00000204961 PDE6BP35913 854 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms