RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ZMYND12Q9H0C1 365 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 PLEKHA4Q9H4M7 779 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 NGRNQ9NPE2 291 aaKnown RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 FAM217BQ9NTX9 383 aaPredicted RBP11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 JRKLQ9Y4A0 524 aa11.13□□□□□ -0.63
NIPAL3-201ENST00000003912 RPS6KA5O75582 802 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 CHGBP05060 677 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 U2AF2P26368 475 aaKnown RBP eCLIP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 EPHB1P54762 984 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 ANTXR2P58335 489 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 FKBP1AP62942 108 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 TXNRD3Q86VQ6 643 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 TAB3Q8N5C8 712 aaPredicted RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 SKA2Q8WVK7 121 aaPredicted RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 MANSC4A6NHS7 340 aaPredicted RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 F8W8V4 182 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 LRRC31Q6UY01 552 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 FMR1NBQ8N0W7 255 aaPredicted RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 PANX2Q96RD6 677 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 TRIM62Q9BVG3 475 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 LGALS16A8MUM7 142 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 A8MXQ7 604 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 CYP2C9P11712 490 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 YWHAGP61981 247 aaKnown RBP eCLIP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 PRKCEQ02156 737 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 EMC2Q15006 297 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 ELF2Q15723 593 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 OPTNQ96CV9 577 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 CALR3Q96L12 384 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 STAP1Q9ULZ2 295 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 CNTNAP5Q8WYK1 1306 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 PGRMC1O00264 195 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 RECQLP46063 649 aaPredicted RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 DNAAF3Q8N9W5 541 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 ACER1Q8TDN7 264 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 PBKQ96KB5 322 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 TNIP3Q96KP6 325 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 FHDC1Q9C0D6 1143 aaPredicted RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 TMX2Q9Y320 296 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 TRIM49BA6NDI0 452 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 STK25O00506 426 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 PDXKO00764 312 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 CXCL11O14625 94 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 CASP1P29466 404 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 GUCY2FP51841 1108 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 DYNLT1P63172 113 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 RWDD4Q6NW29 188 aaKnown RBP11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 GMCL1P1Q8NEA9 526 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 TMEM143Q96AN5 459 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 ASNSD1Q9NWL6 643 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 RNF14Q9UBS8 474 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 PCDHA13Q9Y5I0 950 aa11.12□□□□□ -0.63
NIPAL3-201ENST00000003912 UBE4BO95155 1302 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 KCNB1Q14721 858 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 CDO1Q16878 200 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 PHLDB2Q86SQ0 1253 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 GANCQ8TET4 914 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 ZBTB9Q96C00 473 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 CACYBPQ9HB71 228 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 S100BP04271 92 aaPredicted RBP11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 BRD3Q15059 726 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 GMCL1Q96IK5 515 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 TAAR1Q96RJ0 339 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 MAD2L2Q9UI95 211 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 M0QYV0 167 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 ECEL1O95672 775 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 SCYL1Q96KG9 808 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 KCNH7Q9NS40 1196 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 NDUFA10O95299 355 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 PLS3P13797 630 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 PPP4R1Q8TF05 950 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 INTS2Q9H0H0 1204 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 FAM114A2Q9NRY5 505 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 ADAMTS1Q9UHI8 967 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 PTPN22Q9Y2R2 807 aa11.11□□□□□ -0.63
NIPAL3-201ENST00000003912 SCP2P22307 547 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 COG7P83436 770 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 C3orf67Q6ZVT6 689 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 SLC35F6Q8N357 371 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 FBXL13Q8NEE6 735 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 AFG1LQ8WV93 481 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 GOLPH3LQ9H4A5 285 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 SLC38A7Q9NVC3 462 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 FBXO28Q9NVF7 368 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 FBXO2Q9UK22 296 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 PPP1R9AQ9ULJ8 1098 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 CIB2O75838 187 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 INPP5BP32019 993 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 CYP27A1Q02318 531 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 CCDC13Q8IYE1 715 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 ARRDC4Q8NCT1 418 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 EFCAB8A8MWE9 144 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 TADA2AO75478 443 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 CPP00450 1065 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms