RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Gja6Q6S5G4 283 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Ano10Q8BH79 659 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Syce1Q9D495 329 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Slc6a21A0A1B0GSD2 748 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Scp2P32020 547 aaKnown RBP13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Clcn3P51791 818 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Serpina1eQ00898 413 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Smyd5Q3TYX3 416 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Tp53i13Q5F267 385 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Slc20a2Q80UP8 656 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Prpf31Q8CCF0 499 aaKnown RBP13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Agbl2Q8CDK2 862 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Olfr397Q8VEZ6 315 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Rtfdc1Q99K95 307 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Slc12a9Q99MR3 914 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 CoasyQ9DBL7 563 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Olr1Q9EQ09 363 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Add1Q9QYC0 735 aaKnown RBP13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Pex11aQ9Z211 246 aa13.41□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Ift88Q61371 824 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Cyp2c29Q64458 490 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Krt39Q6IFX4 482 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Nudt16Q6P3D0 195 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Ppp2r5aQ6PD03 486 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 LppQ8BFW7 613 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Kcnk13Q8R1P5 405 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Tnpo2Q99LG2 887 aaKnown RBP13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Cyp2s1Q9DBX6 501 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Abhd2Q9QXM0 425 aa13.4□□□□□ -0.26
Ddx55-202ENSMUST00000111438 Ttll10A4Q9F3 704 aa13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Grm1P97772 1199 aa13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 PodnQ7TQ62 611 aa13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Upb1Q8VC97 393 aa13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Kif17Q99PW8 1038 aa13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Vps33aQ9D2N9 598 aa13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Alg13Q9D8C3 1166 aaKnown RBP13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Xrn2Q9DBR1 951 aaKnown RBP13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Cnpy2Q9QXT0 182 aa13.4□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Gm5934D3Z4U6 212 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Tnni3P48787 211 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Ppm1jQ149T7 507 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Ogfod1Q3U0K8 545 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 TbataQ7TSD4 393 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Fam53cQ8BXQ8 393 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 GanQ8CA72 597 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Med15Q924H2 789 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Tbc1d15Q9CXF4 671 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Cfap45Q9D9U9 551 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Prl2b1Q9DAZ2 228 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Itga2bQ9QUM0 1033 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Ugt1a6bK9J7B2 531 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Slc6a20bO88575 635 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 EpoP07321 192 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Tsg101Q61187 391 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Sycp1Q62209 993 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Ugt1a6Q64435 531 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 March6Q6ZQ89 909 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Ugt1a7cQ6ZQM8 531 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 C2cd5Q7TPS5 1016 aaKnown RBP13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Rasal3Q8C2K5 1041 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Tmem161bQ8C2L6 487 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Otud6bQ8K2H2 294 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 BrdtQ91Y44 956 aa13.39□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Taf1Q80UV9 1891 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Fam129cD3YZB0 591 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Clca3bE9PUL3 1044 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Gm21973F6WEZ7 68 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Kpna6O35345 536 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Nfe2Q07279 373 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Oog4Q4G0C7 502 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Cyp3a11Q64459 504 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Smarca1Q6PGB8 1046 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 F13a1Q8BH61 732 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 March8Q9DBD2 286 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Scgb2b18A0A087WPA9 112 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Tp53P02340 387 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Dnm2P39054 870 aaKnown RBP13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Wdr18Q4VBE8 431 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Xkr4Q5GH67 647 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Crhr2Q60748 411 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Avpr1aQ62463 423 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Ctnna3Q65CL1 895 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Skiv2lQ6NZR5 1244 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Igsf3Q6ZQA6 1194 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Suz12Q80U70 741 aaKnown RBP13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Rassf10Q8BL43 508 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Arid5bQ8BM75 1188 aaKnown RBP13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Slc38a7Q8BWH0 463 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Tlcd1Q99JT6 247 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Zfp623Q9CY99 499 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Fbxo16Q9QZM9 334 aa13.38□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Ankrd16A2AS55 361 aa13.37□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Svs3aF2Z472 265 aa13.37□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Irf8P23611 424 aa13.37□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Frat1P70339 274 aa13.37□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Znf865Q3U3I9 1058 aa13.37□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Tgfbrap1Q3UR70 860 aa13.37□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Cd37Q61470 281 aa13.37□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Celf6Q7TN33 460 aaKnown RBP13.37□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Fam205cQ80YD3 371 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms