RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 OtoaQ8K561 1137 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 ZwintQ9CQU5 252 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Micu3Q9CTY5 523 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Wdr64Q9D565 1086 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Fbxo17Q9QZM8 286 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Peg12Q9WVA7 283 aa13.61□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Col4a4Q9QZR9 1682 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Gm6583E9Q8Z1 469 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Gm16427J3QN52 483 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Aff3P51827 1254 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tfdp1Q08639 410 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Dennd1bQ3U1T9 766 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ddx19aQ61655 478 aaKnown RBP13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ppp1r13bQ62415 1087 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Wdr44Q6NVE8 915 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ccdc85bQ6PDY0 202 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Olfr1046Q7TR79 316 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Pan2Q8BGF7 1200 aaKnown RBP13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ehd2Q8BH64 543 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ftsj1Q8CBC7 324 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Bloc1s2Q9CWG9 143 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Spatc1lQ9D9W0 342 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Ppp2r3cQ9JK24 453 aa13.6□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 1700017N19RikA0A087WPJ1 469 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Cul4bA2A432 970 aaKnown RBP13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 TrdnE9Q9K5 693 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Gm4841E9QAA8 417 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Gm11236J3QMS7 360 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Cdh15P33146 784 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Atp6v1dP57746 247 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Adamts18Q4VC17 1219 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Sema5bQ60519 1093 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 PoliQ6R3M4 717 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tmc3Q7TQ69 1130 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Slc38a9Q8BGD6 560 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Znf473Q8BI67 892 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 AtripQ8BMG1 785 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Tbc1d10cQ8C9V1 444 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Gpc5Q8CAL5 572 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Abi1Q8CBW3 481 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Trim68Q8K243 485 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Trim29Q8R2Q0 587 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Dnajc28Q8VCE1 385 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 Nap1l5Q9JJF0 156 aa13.59□□□□□ -0.23
Ccdc28b-202ENSMUST00000106035 MtrA6H5Y3 1253 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Surf1P09925 306 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 CcnoP0C242 352 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Mkl2P59759 1080 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Plekha7Q3UIL6 1118 aaKnown RBP13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Prkag3Q8BGM7 489 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ttc39bQ8BYY4 617 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Fbxl5Q8C2S5 690 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Mmtag2Q99LX5 260 aaKnown RBP13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Drap1Q9D6N5 205 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Atp13a1Q9EPE9 1200 aaKnown RBP13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Spock2Q9ER58 423 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ralgapa2A3KGS3 1872 aa13.58□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Spocd1B1ASB6 936 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Kcnt2D3Z649 1135 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ccdc152E9PX14 254 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 G430095P16RikE9Q913 147 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ccng2O08918 344 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Fgf18O89101 207 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Psmc2P46471 433 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Epha2Q03145 977 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Smpd1Q04519 627 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Zbtb8osQ505B7 168 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 PtprjQ64455 1238 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Larp6Q8BN59 492 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ugt2b1Q8R084 529 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Rbm12Q8R4X3 992 aaKnown RBP13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 NenfQ9CQ45 171 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Smc3Q9CW03 1217 aaKnown RBP13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Gm28036V9GXJ1 658 aa13.57□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Dsg3O35902 993 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Slc16a2O70324 545 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 NrlP54846 237 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Cd163Q2VLH6 1121 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Skap1Q3UUV5 355 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Pnma5Q5DTT8 618 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Islr2Q5RKR3 745 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Usp17laQ61068 526 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Slc26a2Q62273 739 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ifit1Q64282 463 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Mbtd1Q6P5G3 631 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Vwa2Q70UZ7 791 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Btnl9Q8BJE2 536 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Sec62Q8BU14 398 aaKnown RBP13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Pak2Q8CIN4 524 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Wrap53Q8VC51 532 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Spg21Q9CQC8 308 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ktn1Q61595 1327 aaKnown RBP13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Myh11O08638 1972 aa13.56□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Tatdn2B7ZNL9 783 aaKnown RBP13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Zfp651E9PZ11 729 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Gm11239E9Q5Z9 360 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Gm11237F2Z3W5 360 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Gm11238F2Z478 360 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Bcl7cO08664 217 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Kng1O08677 661 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms