RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Calhm6Q8C9E8 313 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Lsm14bQ8CGC4 385 aaKnown RBP17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Pdia6Q922R8 440 aaKnown RBP17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Ttll10A4Q9F3 704 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Gm5926E9PWJ8 236 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Olfr67F8VPJ8 320 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Hspa8P63017 646 aaKnown RBP17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Mrgprx1Q8CIP3 322 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Kcnq3Q8K3F6 873 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Grin2dQ03391 1323 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Zfp266E9Q2S7 604 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Gfpt1P47856 697 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Klhl14Q69ZK5 630 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Ipo5Q8BKC5 1097 aaKnown RBP17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 B3galt4Q9Z0F0 371 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Bub1bQ9Z1S0 1052 aa17.41■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Zcchc11B2RX14 1644 aaKnown RBP17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Psmc1P62192 440 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Rfx6Q8C7R7 927 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Tmem132cQ8CEF9 1099 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Synpo2Q91YE8 1087 aaKnown RBP17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Atp13a1Q9EPE9 1200 aaKnown RBP17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Gm8994E9PV04 411 aaKnown RBP17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Lmnb1P14733 588 aaKnown RBP17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 VdrP48281 422 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Snai1Q02085 264 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 RnaselQ05921 735 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 IqcmQ149I8 489 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Chrna5Q2MKA5 467 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Atxn7Q8R4I1 867 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Snx24Q9CRB0 169 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Tmem192Q9CXT7 266 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Rgs9O54828 675 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Trappc3O55013 180 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Carmil2Q3V3V9 1296 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Zhx2Q8C0C0 836 aaKnown RBP17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Kbtbd12Q9D618 625 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Chd1P40201 1711 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Rfx8D3YU81 596 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 NfixP70257 488 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Arhgap17Q3UIA2 846 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Pfdn4Q3UWL8 134 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Prr7Q3V0I2 269 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 ItgaeQ60677 1167 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Cd180Q62192 661 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 SmtnQ921U8 923 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Trim7Q923T7 510 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 1700013H16RikQ9DAC5 291 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Doc2gQ9ESN1 387 aa17.4■□□□□ 0.38
Col18a1-202ENSMUST00000081654 Tll1Q62381 1013 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Fhod1Q6P9Q4 1197 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Cyfip1Q7TMB8 1253 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Cep104Q80V31 926 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 SucoQ8C341 1250 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Cse1lQ9ERK4 971 aaKnown RBP17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Ror2Q9Z138 944 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Q3KNL4 93 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 1700109H08RikQ9D9C0 210 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 DcpsQ9DAR7 338 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Cdc42bpbQ7TT50 1713 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Pja1O55176 578 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Nmt1O70310 496 aaKnown RBP17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Man1a2P39098 641 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Ttf2Q5NC05 1138 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Cep95Q8BVV7 827 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Tdrd3Q91W18 743 aaKnown RBP17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Slc5a5Q99PN0 618 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Hebp1Q9R257 190 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Nrxn1Q9CS84 1514 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Atp9bP98195 1146 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Nim1kQ8BHI9 436 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Srgap2Q91Z67 1071 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Slc13a1Q9JHI4 594 aa17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Orc3Q9JK30 715 aaKnown RBP17.39■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Mst1rQ62190 1378 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 MycP01108 439 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Ccdc153P0C7Q1 202 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Rps12P63323 132 aaKnown RBP17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 PighQ5M9N4 188 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Znf148Q61624 794 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Ptpn14Q62130 1189 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Q66JV7 365 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Grm4Q68EF4 912 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Olfr119Q7TRJ5 321 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Ric8bQ80XE1 520 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Rhot1Q8BG51 631 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Ccz1Q8C1Y8 480 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Bud13Q8R149 637 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Nol6Q8R5K4 1152 aaKnown RBP17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Rrp1bQ91YK2 724 aaKnown RBP17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Adgrf5G5E8Q8 1348 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Gm6370A0A0G2JGX9 315 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Gm6309L7N481 315 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Slc3a2P10852 526 aaKnown RBP17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Ppp4cP97470 307 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Rpusd2Q149F1 553 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Fam92bQ3V2J0 292 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Tbc1d22aQ8R5A6 516 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Rhobtb3Q9CTN4 611 aa17.38■□□□□ 0.37
Col18a1-202ENSMUST00000081654 Xab2Q9DCD2 855 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms