RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Smc2Q8CG48 1191 aaKnown RBP13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Unc93b1Q8VCW4 598 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Slc12a9Q99MR3 914 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Gdpd2Q9ESM6 539 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Hs6st3Q9QYK4 470 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 AmfrQ9R049 643 aa13.48□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Cul4bA2A432 970 aaKnown RBP13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Vmn2r87E9PZX4 848 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Cyp2b23E9Q593 491 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Kng1O08677 661 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Nr1i2O54915 431 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Pkn1P70268 946 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ap5z1Q3U829 807 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tcf12Q61286 706 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Wdr44Q6NVE8 915 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tmem117Q8BH18 514 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Clec1aQ8BWY2 269 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ttc39bQ8BYY4 617 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ddx19bQ8BZY3 494 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Lrrd1Q8C0R9 853 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ccdc113Q8C5T8 377 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fam160b1Q8CDM8 764 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 DpydQ8CHR6 1025 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 B4galt3Q91YY2 395 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 B3galt6Q91Z92 325 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 PccaQ91ZA3 724 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Zfp64Q99KE8 643 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 LpxnQ99N69 386 aa13.47□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 1700017N19RikA0A087WPJ1 469 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Klhl34A2AI76 644 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ccdc152E9PX14 254 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Gm4841E9QAA8 417 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ccdc188F6WEU2 249 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Arhgap6O54834 987 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Got1P05201 413 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Grin1P35438 938 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tnni3P48787 211 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 ArvcfP98203 962 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Tfdp1Q08639 410 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Cd163Q2VLH6 1121 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Ubash3aQ3V3E1 624 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Carmil2Q3V3V9 1296 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Prss36Q5K2P8 849 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Slc26a2Q62273 739 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Msantd2Q6NZR2 559 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Lrfn2Q80TG9 788 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Rps6kc1Q8BLK9 1056 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Nrip1Q8CBD1 1161 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Foxe1Q8R2I0 371 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Wrap53Q8VC51 532 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Trim11Q99PQ2 467 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Krt17Q9QWL7 433 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Fbxo17Q9QZM8 286 aa13.46□□□□□ -0.25
Ccdc28a-202ENSMUST00000080860 Plxna4Q80UG2 1893 aa13.46□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 AspmQ8CJ27 3122 aa13.46□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm11236J3QMS7 360 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Terf2O35144 541 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 PargO88622 969 aaKnown RBP13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Krt18P05784 423 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 EpoP07321 192 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Surf1P09925 306 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Xrcc6P23475 608 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 TdgP56581 421 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Smpd1Q04519 627 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Islr2Q5RKR3 745 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ctnna3Q65CL1 895 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Xpnpep1Q6P1B1 623 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Fbxl5Q8C2S5 690 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Polr3fQ921X6 316 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Yeats4Q9CR11 227 aaKnown RBP13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Krtap5-3Q9D226 196 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Pramef12Q9D2F1 463 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Atp13a1Q9EPE9 1200 aaKnown RBP13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Clic4Q9QYB1 253 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Bcl11aQ9QYE3 773 aa13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ttc3O88196 1979 aaKnown RBP13.45□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Spata31d1aE9QA35 1336 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Lrrc37aB1AWG4 3215 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm45015A0A140LII9 184 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ect2lA0A140LIP2 953 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm18336A0A140LIU8 765 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Gm11985A0A1B0GS61 206 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Slc6a16A0A1L1SR47 742 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Spocd1B1ASB6 936 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Efna5O08543 228 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ephb3P54754 993 aaKnown RBP13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Arf4P61750 180 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Nat8lQ3UGX3 299 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Capn13Q3UW68 665 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Usp13Q5BKP2 858 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 IgflQ6B9Z0 140 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ccdc66Q6NS45 935 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ppp2r5aQ6PD03 486 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Proser3Q7TSA6 634 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Trit1Q80UN9 467 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 KyQ8C8H8 661 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Ppp1r16bQ8VHQ3 568 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Necab2Q91ZP9 389 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Mfsd5Q921Y4 450 aa13.44□□□□□ -0.26
Ccdc28a-202ENSMUST00000080860 Map4k3Q99JP0 894 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms