RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Zbtb5Q7TQG0 670 aa24.97■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Calhm6Q8C9E8 313 aa24.97■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Tnpo2Q99LG2 887 aaKnown RBP24.97■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Kdm8Q9CXT6 414 aa24.97■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Slc12a7Q9WVL3 1083 aa24.97■■□□□ 1.59
Upf3a-201ENSMUST00000043767 GclmO09172 274 aaKnown RBP24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Pola2P33611 600 aa24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 DmpkP54265 631 aa24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 PrkczQ02956 592 aa24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Adamts18Q4VC17 1219 aa24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Atp13a4Q5XF90 1193 aa24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Mkrn3Q60764 544 aa24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 D130040H23RikQ8BII3 405 aa24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Q9CYI0 393 aa24.96■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Zfand4D3Z3C6 739 aa24.95■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Gm21973F6WEZ7 68 aa24.95■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Actn3O88990 900 aaKnown RBP24.95■■□□□ 1.59
Upf3a-201ENSMUST00000043767 P01734 135 aa24.95■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Tgfbrap1Q3UR70 860 aa24.95■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Samhd1Q60710 627 aa24.95■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Ddx10Q80Y44 875 aaKnown RBP24.95■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Olr1Q9EQ09 363 aa24.95■■□□□ 1.59
Upf3a-201ENSMUST00000043767 Gm10378F6XQQ1 160 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ovgp1Q62010 721 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Tmem161bQ8C2L6 487 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 SucoQ8C341 1250 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Spice1Q8C804 860 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Trib2Q8K4K3 343 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Med15Q924H2 789 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ppp1r3aQ99MR9 1089 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Cmtr1Q9DBC3 837 aa24.95■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Fam129cD3YZB0 591 aa24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Tlk2O55047 718 aa24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Rpl13P47963 211 aaKnown RBP24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Tnni3P48787 211 aa24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 R3hdm4Q4VBF2 262 aa24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Mybpc2Q5XKE0 1136 aa24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Prpf31Q8CCF0 499 aaKnown RBP24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Fmnl1Q9JL26 1094 aa24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Spint1Q9R097 507 aa24.94■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Prl6a1O35257 230 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Tp53P02340 387 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Trap1aP19473 224 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 SarsP26638 512 aaKnown RBP24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Wnt7bP28047 349 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Arglu1Q3UL36 271 aaKnown RBP24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Acot5Q6Q2Z6 421 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Prpf40bQ80W14 870 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Mamdc2Q8CG85 686 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Map7d2A2AG50 781 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Pip4k2aO70172 405 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Irx2P81066 474 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Tmem35bQ3U0Y2 150 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Icam5Q60625 917 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ahcyl2Q68FL4 613 aaKnown RBP24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 NostrinQ6WKZ7 506 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Cwf19l2Q8BG79 887 aaKnown RBP24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Nim1kQ8BHI9 436 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Rcor2Q8C796 523 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Olfr397Q8VEZ6 315 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Znf704Q9ERQ3 566 aa24.93■■□□□ 1.58
Upf3a-201ENSMUST00000043767 AdssP46664 456 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Cyp2c39P56656 490 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Emc10Q3TAS6 258 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Nudt16Q6P3D0 195 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Arrdc3Q7TPQ9 414 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Cracr2bQ80ZJ8 394 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 RragcQ99K70 398 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 CutaQ9CQ89 177 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 MsraQ9D6Y7 233 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Sptlc1O35704 473 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Fgd3O88842 733 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 AgtP11859 477 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ccr1P51675 355 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Clcn3P51791 818 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Yy1Q00899 414 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Wdr18Q4VBE8 431 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ccdc14Q8K2J4 934 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Sgms1Q8VCQ6 419 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Arhgap8Q9CXP4 425 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Ralgps2Q9ERD6 590 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Gyg1Q9R062 333 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Cdc42ep5Q9Z0X0 150 aa24.92■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Gm1993A6X8I0 212 aa24.91■■□□□ 1.58
Upf3a-201ENSMUST00000043767 SlxD3Z347 212 aa24.91■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Dcaf17Q3TUL7 519 aa24.91■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Oog4Q4G0C7 502 aa24.91■■□□□ 1.58
Upf3a-201ENSMUST00000043767 TbckQ8BM85 762 aa24.91■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Bclaf1Q8K019 919 aaKnown RBP24.91■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Tmco4Q91WU4 631 aa24.91■■□□□ 1.58
Upf3a-201ENSMUST00000043767 MicalclQ9D5U9 680 aa24.91■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Samd1D3YXK1 519 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Gimap9G3X987 291 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Gm8298J3QPI0 401 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Nptx2O70340 429 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Stxbp5lQ5DQR4 1185 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Trim25Q61510 634 aaKnown RBP24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Krt31Q61765 416 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Trmt13Q8BYH3 481 aa24.9■■□□□ 1.58
Upf3a-201ENSMUST00000043767 Zmynd15Q8C0R7 736 aa24.9■■□□□ 1.58
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms