RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 ArP19091 899 aa20.27■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Slc10a5Q5PT54 434 aa20.27■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Msantd2Q6NZR2 559 aa20.27■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Plekhg6Q8R0J1 787 aa20.27■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 SfpqQ8VIJ6 699 aaKnown RBP20.27■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 4921524L21RikQ9D5T2 438 aa20.27■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 PlekQ9JHK5 350 aaKnown RBP20.27■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 C87977A2A958 498 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Fam171a1A2ATK9 892 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 HelqQ2VPA6 1069 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ppp2r5eQ61151 467 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Brd2Q7JJ13 798 aaKnown RBP20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Llgl1Q80Y17 1036 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Q8BGD0 127 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Dennd1aQ8K382 1016 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Bst2Q8R2Q8 172 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Scgb2b20Q9JI02 112 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Znf354bQ9QXT9 601 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Astn1Q61137 1302 aa20.27■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cyth3O08967 399 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Hnrnph2P70333 449 aaKnown RBP20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Atp8a1P70704 1164 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Oca2Q62052 833 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Foxo6Q70KY4 559 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Zbed4Q80WQ9 1168 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Atp2a1Q8R429 994 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Abcf2Q99LE6 628 aaKnown RBP20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 MagohP61327 146 aaKnown RBP20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ccdc84Q4VA36 332 aaKnown RBP20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Pim2Q62070 370 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Dlg4Q62108 724 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Btnl9Q8BJE2 536 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 MagohbQ9CQL1 146 aa20.26■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Vmn2r77L7N2B7 854 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Hnrnph1O35737 449 aaKnown RBP20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Npr3P70180 536 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Edem3Q2HXL6 931 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Vwa3aQ3UVV9 1148 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 HnrnpdQ60668 355 aaKnown RBP20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Npdc1Q64322 332 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Q8BGC1 442 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Depdc1bQ8BH88 529 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Slc4a8Q8JZR6 1089 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Fermt3Q8K1B8 665 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 MyripQ8K3I4 856 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Pdxdc1Q99K01 787 aaKnown RBP20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Pramef12Q9D2F1 463 aa20.25■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Hsf3D0VYS2 492 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Rnaseh1O70338 285 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cyp11b2P15539 500 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Rnf113a2Q14B01 337 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Kctd16Q5DTY9 427 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Adad1Q5SUE7 619 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Klra6Q60653 266 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Rassf10Q8BL43 508 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Calcoco1Q8CGU1 691 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Lrrc45Q8CIM1 670 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Med24Q99K74 987 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Borcs6Q9D6W8 360 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Slc15a2Q9ES07 729 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Itgb4A2A863 1818 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Skor2A7M7C7 1008 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Gm3127E9Q9P5 263 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Gm3453K7N724 263 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 CnpP16330 420 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Q3TTJ4 293 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cplx4Q80WM3 160 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Zhx2Q8C0C0 836 aaKnown RBP20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Kcnv2Q8CFS6 562 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Gprc5cQ8K3J9 440 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Prl2b1Q9DAZ2 228 aa20.24■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Pdk4O70571 412 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 LdhbP16125 334 aaKnown RBP20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Wfs1P56695 890 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ppp3caP63328 521 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cep126Q0VBV7 1103 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Tex11Q14AT2 947 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Pbxip1Q3TVI8 727 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Psmd1Q3TXS7 953 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Mier3Q3UHF3 551 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Ice2Q3UZ18 988 aaKnown RBP20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Slc9a9Q8BZ00 644 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Rapgef5Q8C0Q9 814 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Q8C6G1 249 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cgref1Q8R1U2 281 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Slc35f6Q8VE96 372 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Mettl16Q9CQG2 553 aaKnown RBP20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cfap53Q9D439 514 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 IscuQ9D7P6 168 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Tlr5Q9JLF7 859 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Smchd1Q6P5D8 2007 aaKnown RBP20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Syngap1F6SEU4 1340 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Gm45194A0A140LJG2 572 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 GabreA2AMW3 916 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Cfap70D3YVL2 1141 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Gm8994E9PV04 411 aaKnown RBP20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Zfp266E9Q2S7 604 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Serpinb8O08800 374 aaKnown RBP20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 MyocO70624 490 aa20.23■□□□□ 0.83
Shkbp1-201ENSMUST00000003857 Chmp6P0C0A3 200 aa20.23■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms