RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Iws1Q8C1D8 766 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Edf1Q9JMG1 148 aaKnown RBP17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Cul1Q9WTX6 776 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Mmp15O54732 657 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Idh1O88844 414 aaKnown RBP17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Serpinb6Q60854 378 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Ppp2r2aQ6P1F6 447 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 TwistnbQ78WZ7 330 aaKnown RBP17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Cyp26b1Q811W2 512 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Cpne8Q9DC53 577 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Lypla2Q9WTL7 231 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Cog1Q9Z160 980 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 SrcapA0A087WQ44 3271 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Kmt2eQ3UG20 1868 aa17.78■□□□□ 0.44
Shh-201ENSMUST00000002708 Ace3D0G895 737 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Abl2Q4JIM5 1182 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Znf354cQ571J5 560 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 StilQ60988 1262 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Snx24Q9CRB0 169 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Cabp5Q9JLK3 173 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Stk11Q9WTK7 436 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 CatspereP0DP43 985 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Tph1P17532 447 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Cd68P31996 326 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Jade3Q6IE82 823 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Gprc5cQ8K3J9 440 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Dppa3Q8QZY3 150 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Mrpl11Q9CQF0 192 aaKnown RBP17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Snx10Q9CWT3 201 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Znf354bQ9QXT9 601 aa17.77■□□□□ 0.44
Shh-201ENSMUST00000002708 Fbf1A2A870 1173 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Klc1O88447 541 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 LdhbP16125 334 aaKnown RBP17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Hmgb2P30681 210 aaKnown RBP17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Irx1P81068 480 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Ogfod1Q3U0K8 545 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Sp4Q62445 782 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Bank1Q80VH0 783 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 PdxkQ8K183 312 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Dennd1aQ8K382 1016 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 OtoaQ8K561 1137 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Uchl3Q9JKB1 230 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 DohhA0A1Y7VJ29 135 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Lrrc38A2VDH3 298 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Eftud2O08810 971 aaKnown RBP17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Pja2Q80U04 707 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Tmem39bQ810L4 492 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Pdzph1Q8BGR1 1238 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Calcoco1Q8CGU1 691 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Slc14a1Q8VHL0 384 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Drap1Q9D6N5 205 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Extl2Q9ES89 330 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Ccdc78D3Z5T1 437 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Exoc4O35382 975 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Etv6P97360 485 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Fgfr4Q03142 799 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Ppp2r5cQ60996 524 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Rint1Q8BZ36 792 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Nemp2Q8CB65 421 aa17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 Bzw2Q91VK1 419 aaKnown RBP17.76■□□□□ 0.43
Shh-201ENSMUST00000002708 C87977A2A958 498 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Sema3eP70275 775 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Ccdc84Q4VA36 332 aaKnown RBP17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Ccdc134Q8C7V8 229 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Cbwd1Q8VEH6 393 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 IvdQ9JHI5 424 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Txnrd2Q9JLT4 524 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Fyb2A2A995 729 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Cul4aQ3TCH7 759 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Adad1Q5SUE7 619 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Krt15Q61414 452 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Xlr3bQ6P205 226 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Vgll2Q8BGW8 322 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Nup58Q8R332 587 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Calml4Q91WQ9 153 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Gps2Q921N8 327 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Ssr1Q9CY50 286 aaKnown RBP17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Rasgef1cQ9D300 466 aa17.75■□□□□ 0.43
Shh-201ENSMUST00000002708 Mical3Q8CJ19 1993 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Got1P05201 413 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Chmp6P0C0A3 200 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Tmem132dQ76HP3 1097 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 TbataQ7TSD4 393 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Ccdc28aQ8CEI3 192 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Lrrc45Q8CIM1 670 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Med24Q99K74 987 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Krt71Q9R0H5 524 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Gm4907B1AXB9 411 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Gimap9G3X987 291 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Fam207aP58468 219 aaKnown RBP17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 DcakdQ8BHC4 231 aaKnown RBP17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Zmynd10Q99ML0 440 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Ranbp17Q99NF8 1088 aa17.74■□□□□ 0.43
Shh-201ENSMUST00000002708 Sclt1G5E861 688 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Eif3dO70194 548 aaKnown RBP17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Rgs9bpQ148R9 237 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Mier3Q3UHF3 551 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Q6PD19 689 aa17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Ccdc50Q810U5 305 aaKnown RBP17.73■□□□□ 0.43
Shh-201ENSMUST00000002708 Sap130Q8BIH0 1057 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms