RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W YJR098CP47139 656 aa5.87□□□□□ -1.47
YOP1YPR028W TCB1Q12466 1186 aa5.87□□□□□ -1.47
YOP1YPR028W TY1A-MR1Q04215 440 aa5.86□□□□□ -1.47
YOP1YPR028W DLD1P32891 587 aa5.85□□□□□ -1.47
YOP1YPR028W YBL086CP38177 466 aa5.85□□□□□ -1.47
YOP1YPR028W OSH7P38755 437 aa5.85□□□□□ -1.47
YOP1YPR028W TRM1P15565 570 aaKnown RBP5.84□□□□□ -1.47
YOP1YPR028W MDJ1P35191 511 aa5.84□□□□□ -1.47
YOP1YPR028W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
YOP1YPR028W NUP42P49686 430 aaKnown RBP5.84□□□□□ -1.47
YOP1YPR028W LYS5P50113 272 aa5.84□□□□□ -1.47
YOP1YPR028W DSF2P38213 736 aa5.83□□□□□ -1.48
YOP1YPR028W NRD1P53617 575 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
YOP1YPR028W CCP1P00431 361 aa5.81□□□□□ -1.48
YOP1YPR028W VAC17P25591 423 aa5.81□□□□□ -1.48
YOP1YPR028W SCJ1P25303 377 aa5.8□□□□□ -1.48
YOP1YPR028W JJJ3P47138 172 aa5.79□□□□□ -1.48
YOP1YPR028W NSG2P53898 299 aa5.79□□□□□ -1.48
YOP1YPR028W HST2P53686 357 aa5.78□□□□□ -1.48
YOP1YPR028W APP1P53933 587 aa5.77□□□□□ -1.49
YOP1YPR028W DIT2P21595 489 aa5.76□□□□□ -1.49
YOP1YPR028W EMW1P42842 904 aaKnown RBP5.75□□□□□ -1.49
YOP1YPR028W MMP1Q12372 583 aa5.75□□□□□ -1.49
YOP1YPR028W THI72Q08579 599 aa5.74□□□□□ -1.49
YOP1YPR028W CCT8P47079 568 aaKnown RBP5.73□□□□□ -1.49
YOP1YPR028W ITT1Q04638 464 aa5.73□□□□□ -1.49
YOP1YPR028W AI1P03875 834 aa5.71□□□□□ -1.5
YOP1YPR028W YFL066CP43538 392 aa5.71□□□□□ -1.5
YOP1YPR028W NAM8Q00539 523 aaKnown RBP5.71□□□□□ -1.5
YOP1YPR028W GLN1P32288 370 aaKnown RBP5.7□□□□□ -1.5
YOP1YPR028W CDC19P00549 500 aaKnown RBP5.69□□□□□ -1.5
YOP1YPR028W ESS1P22696 170 aa5.68□□□□□ -1.5
YOP1YPR028W MKS1P34072 584 aa5.68□□□□□ -1.5
YOP1YPR028W DFG5Q05031 458 aa5.68□□□□□ -1.5
YOP1YPR028W SBP1P10080 294 aaKnown RBP5.65□□□□□ -1.5
YOP1YPR028W YJU3P28321 313 aa5.65□□□□□ -1.5
YOP1YPR028W CUZ1P53899 274 aa5.65□□□□□ -1.5
YOP1YPR028W BDS1Q08347 646 aa5.65□□□□□ -1.5
YOP1YPR028W YPR053CQ6Q5F3 151 aa5.65□□□□□ -1.5
YOP1YPR028W SPB4P25808 606 aaPredicted RBP5.64□□□□□ -1.51
YOP1YPR028W RSC30P38781 883 aa5.64□□□□□ -1.51
YOP1YPR028W CEM1P39525 442 aa5.63□□□□□ -1.51
YOP1YPR028W VTC4P47075 721 aa5.63□□□□□ -1.51
YOP1YPR028W FBP26P32604 452 aa5.6□□□□□ -1.51
YOP1YPR028W FIG4P42837 879 aa5.6□□□□□ -1.51
YOP1YPR028W SKN7P38889 622 aa5.59□□□□□ -1.51
YOP1YPR028W ATF2P53296 535 aa5.59□□□□□ -1.51
YOP1YPR028W STE6P12866 1290 aa5.58□□□□□ -1.52
YOP1YPR028W DAL1P32375 460 aa5.58□□□□□ -1.52
YOP1YPR028W ADE12P80210 433 aaKnown RBP5.58□□□□□ -1.52
YOP1YPR028W SAS10Q12136 610 aaPredicted RBP5.58□□□□□ -1.52
YOP1YPR028W YMR187CQ03236 431 aa5.56□□□□□ -1.52
YOP1YPR028W TDA6Q06466 467 aa5.56□□□□□ -1.52
YOP1YPR028W ARG8P18544 423 aa5.55□□□□□ -1.52
YOP1YPR028W SBE2P42223 864 aaKnown RBP5.55□□□□□ -1.52
YOP1YPR028W PKH3Q03306 898 aaPredicted RBP5.55□□□□□ -1.52
YOP1YPR028W SYT1Q06836 1226 aa5.55□□□□□ -1.52
YOP1YPR028W YMR265CQ03508 461 aaKnown RBP5.54□□□□□ -1.52
YOP1YPR028W DIT1P21623 536 aa5.53□□□□□ -1.52
YOP1YPR028W TEC1P18412 486 aa5.52□□□□□ -1.53
YOP1YPR028W UBP15P50101 1230 aa5.51□□□□□ -1.53
YOP1YPR028W DLD3P39976 496 aaKnown RBP5.5□□□□□ -1.53
YOP1YPR028W KRE33P53914 1056 aaKnown RBP5.5□□□□□ -1.53
YOP1YPR028W ISU1Q03020 165 aa5.5□□□□□ -1.53
YOP1YPR028W YPR084WQ06821 456 aa5.5□□□□□ -1.53
YOP1YPR028W YDR461C-AQ2V2P7 80 aa5.5□□□□□ -1.53
YOP1YPR028W KTR1P27810 393 aaKnown RBP5.49□□□□□ -1.53
YOP1YPR028W RPP2BP02400 110 aaKnown RBP5.48□□□□□ -1.53
YOP1YPR028W MCX1P38323 520 aaPredicted RBP5.48□□□□□ -1.53
YOP1YPR028W YNR014WP53719 212 aa5.48□□□□□ -1.53
YOP1YPR028W ATG20Q07528 640 aa5.47□□□□□ -1.53
YOP1YPR028W YCK2P23292 546 aaKnown RBP5.44□□□□□ -1.54
YOP1YPR028W GUT2P32191 649 aa5.44□□□□□ -1.54
YOP1YPR028W MSN5P52918 1224 aa5.44□□□□□ -1.54
YOP1YPR028W SLA1P32790 1244 aa5.43□□□□□ -1.54
YOP1YPR028W SSN3P39073 555 aa5.43□□□□□ -1.54
YOP1YPR028W GLC3P32775 704 aa5.42□□□□□ -1.54
YOP1YPR028W YNR021WP53723 404 aaKnown RBP5.42□□□□□ -1.54
YOP1YPR028W RAD59Q12223 238 aa5.42□□□□□ -1.54
YOP1YPR028W AMN1P38285 549 aaPredicted RBP5.41□□□□□ -1.54
YOP1YPR028W BOI2P39969 1040 aa5.41□□□□□ -1.54
YOP1YPR028W YDR215CQ12240 137 aa5.41□□□□□ -1.54
YOP1YPR028W GPM1P00950 247 aaKnown RBP5.4□□□□□ -1.54
YOP1YPR028W CSN12P47130 423 aa5.4□□□□□ -1.54
YOP1YPR028W TY1A-DR3Q12441 440 aa5.4□□□□□ -1.54
YOP1YPR028W GLT1Q12680 2145 aaKnown RBP5.39□□□□□ -1.55
YOP1YPR028W AHP1P38013 176 aaKnown RBP5.39□□□□□ -1.55
YOP1YPR028W SLN1P39928 1220 aaPredicted RBP5.39□□□□□ -1.55
YOP1YPR028W LSB6P42951 607 aa5.39□□□□□ -1.55
YOP1YPR028W WTM2Q12206 467 aa5.39□□□□□ -1.55
YOP1YPR028W STE20Q03497 939 aaKnown RBP5.37□□□□□ -1.55
YOP1YPR028W MCA1Q08601 432 aa5.37□□□□□ -1.55
YOP1YPR028W FPS1P23900 669 aa5.36□□□□□ -1.55
YOP1YPR028W MAC1P35192 417 aa5.36□□□□□ -1.55
YOP1YPR028W MET1P36150 593 aa5.36□□□□□ -1.55
YOP1YPR028W TAT1P38085 619 aa5.35□□□□□ -1.55
YOP1YPR028W FRA1Q07825 749 aa5.35□□□□□ -1.55
YOP1YPR028W MAK16P10962 306 aaPredicted RBP5.34□□□□□ -1.55
YOP1YPR028W DAT1P13483 248 aaKnown RBP5.34□□□□□ -1.55
YOP1YPR028W SPT2P06843 333 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms