RNA–Protein interactions for RNA: YNL236W

SIN4, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SIN4, Length 2,925 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIN4	YNL236W	MSB4	Q12317	492 aa		4.93	□□□□□ -1.62
SIN4	YNL236W	ROM1	P53046	1155 aa		4.92	□□□□□ -1.62
SIN4	YNL236W	TEC1	P18412	486 aa		4.92	□□□□□ -1.62
SIN4	YNL236W	NPL4	P33755	580 aa		4.92	□□□□□ -1.62
SIN4	YNL236W	MET1	P36150	593 aa		4.92	□□□□□ -1.62
SIN4	YNL236W	NUT2	Q06213	157 aa		4.92	□□□□□ -1.62
SIN4	YNL236W	MPC54	Q08550	464 aa		4.92	□□□□□ -1.62
SIN4	YNL236W	GUT2	P32191	649 aa		4.91	□□□□□ -1.62
SIN4	YNL236W	QDR1	P40475	563 aa		4.91	□□□□□ -1.62
SIN4	YNL236W	PDI1	P17967	522 aa	Known RBP	4.91	□□□□□ -1.62
SIN4	YNL236W	STB3	Q12427	513 aa		4.91	□□□□□ -1.62
SIN4	YNL236W	SRS2	P12954	1174 aa		4.9	□□□□□ -1.62
SIN4	YNL236W	ISU2	Q12056	156 aa		4.9	□□□□□ -1.62
SIN4	YNL236W	FRA1	Q07825	749 aa		4.9	□□□□□ -1.63
SIN4	YNL236W	FRT1	Q99332	602 aa		4.9	□□□□□ -1.63
SIN4	YNL236W	PEX29	Q03370	554 aa		4.9	□□□□□ -1.63
SIN4	YNL236W	TRP5	P00931	707 aa	Known RBP	4.89	□□□□□ -1.63
SIN4	YNL236W	VAN1	P23642	535 aa		4.89	□□□□□ -1.63
SIN4	YNL236W	FIG4	P42837	879 aa		4.89	□□□□□ -1.63
SIN4	YNL236W	YAF9	P53930	226 aa		4.89	□□□□□ -1.63
SIN4	YNL236W	PML39	Q03760	334 aa		4.89	□□□□□ -1.63
SIN4	YNL236W	VAC8	P39968	578 aa		4.89	□□□□□ -1.63
SIN4	YNL236W	TUB4	P53378	473 aa		4.89	□□□□□ -1.63
SIN4	YNL236W	MAG2	Q06436	670 aa	Known RBP	4.89	□□□□□ -1.63
SIN4	YNL236W	GAS4	Q08271	471 aa		4.89	□□□□□ -1.63
SIN4	YNL236W	NMD2	P38798	1089 aa	Known RBP	4.88	□□□□□ -1.63
SIN4	YNL236W	YOL098C	Q12496	1037 aa		4.88	□□□□□ -1.63
SIN4	YNL236W	TSC13	Q99190	310 aa		4.88	□□□□□ -1.63
SIN4	YNL236W	ACF4	P47129	309 aa		4.88	□□□□□ -1.63
SIN4	YNL236W	RNH70	P53331	553 aa		4.88	□□□□□ -1.63
SIN4	YNL236W	NMA111	P53920	997 aa		4.88	□□□□□ -1.63
SIN4	YNL236W	DOS2	P54858	310 aa		4.88	□□□□□ -1.63
SIN4	YNL236W	PPG1	P32838	368 aa		4.87	□□□□□ -1.63
SIN4	YNL236W	MET4	P32389	672 aa		4.87	□□□□□ -1.63
SIN4	YNL236W	GCD11	P32481	527 aa	Known RBP	4.87	□□□□□ -1.63
SIN4	YNL236W	EAP1	P36041	632 aa	Known RBP	4.87	□□□□□ -1.63
SIN4	YNL236W	YJR107W	P47145	328 aa		4.87	□□□□□ -1.63
SIN4	YNL236W	FAR11	P53917	953 aa		4.87	□□□□□ -1.63
SIN4	YNL236W	FYV10	P40492	516 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	RPA14	P50106	137 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	JIP4	Q03361	876 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	ALR1	Q08269	859 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	TRS33	Q99394	268 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	PDR1	P12383	1068 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	SRP40	P32583	406 aa	Predicted RBP	4.86	□□□□□ -1.63
SIN4	YNL236W	MAD1	P40957	749 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	ALD6	P54115	500 aa	Known RBP	4.86	□□□□□ -1.63
SIN4	YNL236W	MNL2	Q12205	849 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	ISM1	P48526	1002 aa		4.86	□□□□□ -1.63
SIN4	YNL236W	MIP1	P15801	1254 aa		4.85	□□□□□ -1.63
SIN4	YNL236W	RAM1	P22007	431 aa		4.85	□□□□□ -1.63
SIN4	YNL236W	MCM2	P29469	868 aa		4.85	□□□□□ -1.63
SIN4	YNL236W	YPR084W	Q06821	456 aa		4.85	□□□□□ -1.63
SIN4	YNL236W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
SIN4	YNL236W	ALD3	P54114	506 aa		4.85	□□□□□ -1.63
SIN4	YNL236W	UTP13	Q05946	817 aa	Known RBP	4.85	□□□□□ -1.63
SIN4	YNL236W	YPR097W	Q06839	1073 aa		4.85	□□□□□ -1.63
SIN4	YNL236W	PEP7	P32609	515 aa		4.84	□□□□□ -1.63
SIN4	YNL236W	STR2	P47164	639 aa		4.84	□□□□□ -1.63
SIN4	YNL236W	AGE1	Q04412	482 aa		4.84	□□□□□ -1.63
SIN4	YNL236W	SPR28	Q04921	423 aa		4.84	□□□□□ -1.63
SIN4	YNL236W	YKL091C	P33324	310 aa	Known RBP	4.83	□□□□□ -1.64
SIN4	YNL236W	RPT1	P33299	467 aa	Known RBP	4.83	□□□□□ -1.64
SIN4	YNL236W	APL6	P46682	809 aa		4.83	□□□□□ -1.64
SIN4	YNL236W	AIM9	P40053	627 aa	Known RBP	4.83	□□□□□ -1.64
SIN4	YNL236W	YFL034W	P43564	1073 aa		4.83	□□□□□ -1.64
SIN4	YNL236W	ISR1	Q06098	443 aa	Known RBP	4.83	□□□□□ -1.64
SIN4	YNL236W	CWH41	P53008	833 aa		4.82	□□□□□ -1.64
SIN4	YNL236W	HAL5	P38970	855 aa	Known RBP	4.82	□□□□□ -1.64
SIN4	YNL236W	LSO1	Q3E827	93 aa		4.82	□□□□□ -1.64
SIN4	YNL236W	SPT2	P06843	333 aa	Predicted RBP	4.81	□□□□□ -1.64
SIN4	YNL236W	NTH2	P35172	780 aa		4.81	□□□□□ -1.64
SIN4	YNL236W	ULI1	P43604	169 aa		4.81	□□□□□ -1.64
SIN4	YNL236W	IXR1	P33417	597 aa		4.81	□□□□□ -1.64
SIN4	YNL236W	RRP14	P36080	434 aa	Known RBP	4.81	□□□□□ -1.64
SIN4	YNL236W	BOI1	P38041	980 aa	Known RBP	4.81	□□□□□ -1.64
SIN4	YNL236W	TRS120	Q04183	1289 aa		4.81	□□□□□ -1.64
SIN4	YNL236W	WRS1	Q12109	432 aa	Known RBP	4.81	□□□□□ -1.64
SIN4	YNL236W	TOP1	P04786	769 aa		4.8	□□□□□ -1.64
SIN4	YNL236W	PDC1	P06169	563 aa	Known RBP	4.8	□□□□□ -1.64
SIN4	YNL236W	PAC1	P39946	494 aa	Known RBP	4.8	□□□□□ -1.64
SIN4	YNL236W	SPR3	P41901	512 aa		4.8	□□□□□ -1.64
SIN4	YNL236W	KXD1	P53158	218 aa		4.8	□□□□□ -1.64
SIN4	YNL236W	FOX2	Q02207	900 aa	Known RBP	4.8	□□□□□ -1.64
SIN4	YNL236W	SUV3	P32580	737 aa		4.8	□□□□□ -1.64
SIN4	YNL236W	YJR008W	P47085	338 aa		4.8	□□□□□ -1.64
SIN4	YNL236W	HDA3	Q06623	655 aa		4.8	□□□□□ -1.64
SIN4	YNL236W	TY1A-DR4	O74302	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-H	P0C2I4	478 aa	Known RBP	4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-A	P0CX57	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-PR1	P0CX58	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-OR	P0CX59	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-PR2	P0CX60	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-DR5	P0CX65	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-ER2	P0CX66	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-GR3	P0CX67	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-LR1	P0CX68	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-MR2	P0CX69	440 aa		4.79	□□□□□ -1.64
SIN4	YNL236W	BUD31	P25337	157 aa	Predicted RBP	4.79	□□□□□ -1.64
SIN4	YNL236W	TY1A-JR2	P47099	440 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms