RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W DSF2P38213 736 aa5.91□□□□□ -1.46
CBF5YLR175W SLM3Q12093 417 aa5.91□□□□□ -1.46
CBF5YLR175W ENT1Q12518 454 aa5.91□□□□□ -1.46
CBF5YLR175W RPO41P13433 1351 aaKnown RBP5.91□□□□□ -1.46
CBF5YLR175W DPS1P04802 557 aaKnown RBP5.9□□□□□ -1.46
CBF5YLR175W MSB3P48566 633 aaPredicted RBP5.9□□□□□ -1.46
CBF5YLR175W HIM1Q06674 414 aa5.9□□□□□ -1.46
CBF5YLR175W YOR238WQ08634 303 aa5.9□□□□□ -1.46
CBF5YLR175W YIL177CP40434 1758 aa5.9□□□□□ -1.47
CBF5YLR175W YJL225CP40889 1758 aa5.9□□□□□ -1.47
CBF5YLR175W PBS2P08018 668 aa5.9□□□□□ -1.47
CBF5YLR175W APP1P53933 587 aa5.9□□□□□ -1.47
CBF5YLR175W GAS4Q08271 471 aa5.9□□□□□ -1.47
CBF5YLR175W RSF2P46974 1380 aa5.89□□□□□ -1.47
CBF5YLR175W NSR1P27476 414 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
CBF5YLR175W EDS1P38073 919 aa5.89□□□□□ -1.47
CBF5YLR175W TGL3P40308 642 aa5.89□□□□□ -1.47
CBF5YLR175W ENV9Q08651 330 aa5.89□□□□□ -1.47
CBF5YLR175W TCB1Q12466 1186 aa5.89□□□□□ -1.47
CBF5YLR175W APC1P53886 1748 aa5.88□□□□□ -1.47
CBF5YLR175W FKS3Q04952 1785 aa5.87□□□□□ -1.47
CBF5YLR175W RRP46P53256 223 aaPredicted RBP5.87□□□□□ -1.47
CBF5YLR175W URB1P34241 1764 aaKnown RBP5.87□□□□□ -1.47
CBF5YLR175W RPP0P05317 312 aaKnown RBP5.86□□□□□ -1.47
CBF5YLR175W YAP5P40574 245 aa5.86□□□□□ -1.47
CBF5YLR175W REF2P42073 533 aaPredicted RBP5.86□□□□□ -1.47
CBF5YLR175W SNF2P22082 1703 aa5.86□□□□□ -1.47
CBF5YLR175W IMH1Q06704 911 aaKnown RBP5.85□□□□□ -1.47
CBF5YLR175W SIR4P11978 1358 aa5.85□□□□□ -1.47
CBF5YLR175W PTC3P34221 468 aaKnown RBP5.84□□□□□ -1.47
CBF5YLR175W XKS1P42826 600 aa5.84□□□□□ -1.47
CBF5YLR175W PAP2P53632 584 aaKnown RBP5.84□□□□□ -1.47
CBF5YLR175W YRF1-3P0CX14 1859 aa5.84□□□□□ -1.48
CBF5YLR175W YRF1-7P0CX15 1859 aa5.84□□□□□ -1.48
CBF5YLR175W YRF1-6P53819 1859 aa5.84□□□□□ -1.48
CBF5YLR175W YRF1-4O13559 1382 aa5.84□□□□□ -1.48
CBF5YLR175W AKL1P38080 1108 aaKnown RBP5.83□□□□□ -1.48
CBF5YLR175W IES2P40154 320 aa5.83□□□□□ -1.48
CBF5YLR175W DSD1P53095 428 aa5.83□□□□□ -1.48
CBF5YLR175W CTF4Q01454 927 aa5.83□□□□□ -1.48
CBF5YLR175W ROM2P51862 1356 aaKnown RBP5.83□□□□□ -1.48
CBF5YLR175W PRD1P25375 712 aa5.83□□□□□ -1.48
CBF5YLR175W PRS1P32895 427 aaKnown RBP5.83□□□□□ -1.48
CBF5YLR175W RTR1P40084 226 aaPredicted RBP5.83□□□□□ -1.48
CBF5YLR175W MAM3Q12296 706 aa5.83□□□□□ -1.48
CBF5YLR175W VPS27P40343 622 aaKnown RBP5.82□□□□□ -1.48
CBF5YLR175W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
CBF5YLR175W YNR021WP53723 404 aaKnown RBP5.82□□□□□ -1.48
CBF5YLR175W DMA2P53924 522 aa5.82□□□□□ -1.48
CBF5YLR175W YDL144CQ07589 356 aa5.82□□□□□ -1.48
CBF5YLR175W PIB1Q06651 286 aa5.81□□□□□ -1.48
CBF5YLR175W YKL133CP36066 463 aa5.8□□□□□ -1.48
CBF5YLR175W MEC3Q02574 474 aa5.8□□□□□ -1.48
CBF5YLR175W CDC45Q08032 650 aa5.8□□□□□ -1.48
CBF5YLR175W MAK21Q12176 1025 aaKnown RBP5.8□□□□□ -1.48
CBF5YLR175W VMA1P17255 1071 aaKnown RBP5.79□□□□□ -1.48
CBF5YLR175W HSP104P31539 908 aaKnown RBP5.79□□□□□ -1.48
CBF5YLR175W NTH2P35172 780 aa5.79□□□□□ -1.48
CBF5YLR175W MPP10P47083 593 aaKnown RBP5.79□□□□□ -1.48
CBF5YLR175W YRB30P53107 440 aaPredicted RBP5.79□□□□□ -1.48
CBF5YLR175W YNL050CP53952 270 aa5.79□□□□□ -1.48
CBF5YLR175W THI22Q06490 572 aa5.79□□□□□ -1.48
CBF5YLR175W EDE1P34216 1381 aa5.79□□□□□ -1.48
CBF5YLR175W COX6P00427 148 aa5.78□□□□□ -1.48
CBF5YLR175W DOT5P40553 215 aa5.78□□□□□ -1.48
CBF5YLR175W AOS1Q06624 347 aa5.78□□□□□ -1.48
CBF5YLR175W INP54Q08227 384 aaKnown RBP5.78□□□□□ -1.48
CBF5YLR175W ADE16P54113 591 aaKnown RBP5.77□□□□□ -1.49
CBF5YLR175W YMR074CQ04773 145 aa5.77□□□□□ -1.49
CBF5YLR175W UBP9P39967 754 aa5.77□□□□□ -1.49
CBF5YLR175W MAM1P40065 302 aa5.77□□□□□ -1.49
CBF5YLR175W YFR016CP43597 1233 aaKnown RBP5.77□□□□□ -1.49
CBF5YLR175W HEF3P53978 1044 aaKnown RBP5.77□□□□□ -1.49
CBF5YLR175W FOX2Q02207 900 aaKnown RBP5.77□□□□□ -1.49
CBF5YLR175W NUP145P49687 1317 aa5.76□□□□□ -1.49
CBF5YLR175W KIN1P13185 1064 aa5.76□□□□□ -1.49
CBF5YLR175W SUI2P20459 304 aaKnown RBP5.76□□□□□ -1.49
CBF5YLR175W DIT2P21595 489 aa5.76□□□□□ -1.49
CBF5YLR175W GLN1P32288 370 aaKnown RBP5.76□□□□□ -1.49
CBF5YLR175W SAP155P43612 1002 aa5.76□□□□□ -1.49
CBF5YLR175W NUP42P49686 430 aaKnown RBP5.76□□□□□ -1.49
CBF5YLR175W GRE2Q12068 342 aaKnown RBP5.76□□□□□ -1.49
CBF5YLR175W OSM1P21375 501 aaKnown RBP5.75□□□□□ -1.49
CBF5YLR175W UGA3P26370 528 aa5.75□□□□□ -1.49
CBF5YLR175W GUT1P32190 709 aa5.75□□□□□ -1.49
CBF5YLR175W ATH1P48016 1211 aa5.75□□□□□ -1.49
CBF5YLR175W ZDS1P50111 915 aaKnown RBP5.75□□□□□ -1.49
CBF5YLR175W FRK1Q03002 865 aaPredicted RBP5.75□□□□□ -1.49
CBF5YLR175W RTT109Q07794 436 aa5.75□□□□□ -1.49
CBF5YLR175W AIM7Q12156 149 aa5.75□□□□□ -1.49
CBF5YLR175W RVB2Q12464 471 aaKnown RBP5.75□□□□□ -1.49
CBF5YLR175W MST1P07236 462 aa5.74□□□□□ -1.49
CBF5YLR175W KCC4P25389 1037 aa5.74□□□□□ -1.49
CBF5YLR175W TPD3P31383 635 aa5.74□□□□□ -1.49
CBF5YLR175W GLC3P32775 704 aa5.74□□□□□ -1.49
CBF5YLR175W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
CBF5YLR175W LYS2P07702 1392 aa5.74□□□□□ -1.49
CBF5YLR175W COBP00163 385 aa5.73□□□□□ -1.49
CBF5YLR175W YKR075CP36155 307 aa5.73□□□□□ -1.49
CBF5YLR175W GYP7P48365 746 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms