RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C YJR098CP47139 656 aa8.21□□□□□ -1.1
CCE1YKL011C YBL086CP38177 466 aa8.2□□□□□ -1.1
CCE1YKL011C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
CCE1YKL011C ROG3P43602 733 aa8.2□□□□□ -1.1
CCE1YKL011C SCJ1P25303 377 aa8.19□□□□□ -1.1
CCE1YKL011C DLD1P32891 587 aa8.19□□□□□ -1.1
CCE1YKL011C DPH6Q12429 685 aa8.19□□□□□ -1.1
CCE1YKL011C TY1A-MR1Q04215 440 aa8.18□□□□□ -1.1
CCE1YKL011C TCB1Q12466 1186 aa8.18□□□□□ -1.1
CCE1YKL011C CCP1P00431 361 aa8.17□□□□□ -1.1
CCE1YKL011C DIT2P21595 489 aa8.17□□□□□ -1.1
CCE1YKL011C VAC17P25591 423 aa8.17□□□□□ -1.1
CCE1YKL011C HST2P53686 357 aa8.16□□□□□ -1.1
CCE1YKL011C OSH7P38755 437 aa8.14□□□□□ -1.11
CCE1YKL011C PHM7Q12252 991 aa8.14□□□□□ -1.11
CCE1YKL011C MDJ1P35191 511 aa8.11□□□□□ -1.11
CCE1YKL011C RQC2Q12532 1038 aaKnown RBP8.1□□□□□ -1.11
CCE1YKL011C JJJ3P47138 172 aa8.09□□□□□ -1.11
CCE1YKL011C LYS5P50113 272 aa8.09□□□□□ -1.11
CCE1YKL011C APP1P53933 587 aa8.09□□□□□ -1.11
CCE1YKL011C ITT1Q04638 464 aa8.08□□□□□ -1.12
CCE1YKL011C MMP1Q12372 583 aa8.08□□□□□ -1.12
CCE1YKL011C EMW1P42842 904 aaKnown RBP8.07□□□□□ -1.12
CCE1YKL011C ESS1P22696 170 aa8.03□□□□□ -1.12
CCE1YKL011C NSG2P53898 299 aa8.02□□□□□ -1.13
CCE1YKL011C GLN1P32288 370 aaKnown RBP8.01□□□□□ -1.13
CCE1YKL011C YJU3P28321 313 aa8□□□□□ -1.13
CCE1YKL011C NRD1P53617 575 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
CCE1YKL011C NAM8Q00539 523 aaKnown RBP8□□□□□ -1.13
CCE1YKL011C SAS10Q12136 610 aaPredicted RBP8□□□□□ -1.13
CCE1YKL011C CDC19P00549 500 aaKnown RBP7.98□□□□□ -1.13
CCE1YKL011C RSC30P38781 883 aa7.98□□□□□ -1.13
CCE1YKL011C YFL066CP43538 392 aa7.97□□□□□ -1.13
CCE1YKL011C DFG5Q05031 458 aa7.97□□□□□ -1.13
CCE1YKL011C SPB4P25808 606 aaPredicted RBP7.96□□□□□ -1.14
CCE1YKL011C MKS1P34072 584 aa7.96□□□□□ -1.14
CCE1YKL011C CCT8P47079 568 aaKnown RBP7.96□□□□□ -1.14
CCE1YKL011C THI72Q08579 599 aa7.95□□□□□ -1.14
CCE1YKL011C AI1P03875 834 aa7.91□□□□□ -1.14
CCE1YKL011C FIG4P42837 879 aa7.91□□□□□ -1.14
CCE1YKL011C CUZ1P53899 274 aa7.89□□□□□ -1.15
CCE1YKL011C BDS1Q08347 646 aa7.89□□□□□ -1.15
CCE1YKL011C VTC4P47075 721 aa7.88□□□□□ -1.15
CCE1YKL011C FBP26P32604 452 aa7.86□□□□□ -1.15
CCE1YKL011C DMA1P38823 416 aa7.86□□□□□ -1.15
CCE1YKL011C STE6P12866 1290 aa7.85□□□□□ -1.15
CCE1YKL011C ATF2P53296 535 aa7.85□□□□□ -1.15
CCE1YKL011C PKH3Q03306 898 aaPredicted RBP7.84□□□□□ -1.15
CCE1YKL011C YPR053CQ6Q5F3 151 aa7.84□□□□□ -1.15
CCE1YKL011C KTR1P27810 393 aaKnown RBP7.83□□□□□ -1.16
CCE1YKL011C CEM1P39525 442 aa7.82□□□□□ -1.16
CCE1YKL011C ARG8P18544 423 aa7.8□□□□□ -1.16
CCE1YKL011C YPR084WQ06821 456 aa7.8□□□□□ -1.16
CCE1YKL011C DAL1P32375 460 aa7.79□□□□□ -1.16
CCE1YKL011C TEC1P18412 486 aa7.78□□□□□ -1.16
CCE1YKL011C SKN7P38889 622 aa7.77□□□□□ -1.17
CCE1YKL011C SBE2P42223 864 aaKnown RBP7.76□□□□□ -1.17
CCE1YKL011C SYT1Q06836 1226 aa7.76□□□□□ -1.17
CCE1YKL011C SBP1P10080 294 aaKnown RBP7.75□□□□□ -1.17
CCE1YKL011C ADE12P80210 433 aaKnown RBP7.75□□□□□ -1.17
CCE1YKL011C TDA6Q06466 467 aa7.74□□□□□ -1.17
CCE1YKL011C GLC3P32775 704 aa7.73□□□□□ -1.17
CCE1YKL011C DIT1P21623 536 aa7.72□□□□□ -1.17
CCE1YKL011C ISU1Q03020 165 aa7.72□□□□□ -1.17
CCE1YKL011C YMR265CQ03508 461 aaKnown RBP7.71□□□□□ -1.18
CCE1YKL011C UBP15P50101 1230 aa7.7□□□□□ -1.18
CCE1YKL011C YNR021WP53723 404 aaKnown RBP7.7□□□□□ -1.18
CCE1YKL011C YMR187CQ03236 431 aa7.7□□□□□ -1.18
CCE1YKL011C ATG20Q07528 640 aa7.68□□□□□ -1.18
CCE1YKL011C RAD59Q12223 238 aa7.68□□□□□ -1.18
CCE1YKL011C YDR461C-AQ2V2P7 80 aa7.68□□□□□ -1.18
CCE1YKL011C DLD3P39976 496 aaKnown RBP7.67□□□□□ -1.18
CCE1YKL011C KRE33P53914 1056 aaKnown RBP7.67□□□□□ -1.18
CCE1YKL011C SLA1P32790 1244 aa7.66□□□□□ -1.18
CCE1YKL011C TY1A-DR3Q12441 440 aa7.65□□□□□ -1.18
CCE1YKL011C GUT2P32191 649 aa7.64□□□□□ -1.19
CCE1YKL011C MCX1P38323 520 aaPredicted RBP7.63□□□□□ -1.19
CCE1YKL011C SSN3P39073 555 aa7.63□□□□□ -1.19
CCE1YKL011C CSN12P47130 423 aa7.63□□□□□ -1.19
CCE1YKL011C MSN5P52918 1224 aa7.63□□□□□ -1.19
CCE1YKL011C RPP2BP02400 110 aaKnown RBP7.62□□□□□ -1.19
CCE1YKL011C YCK2P23292 546 aaKnown RBP7.62□□□□□ -1.19
CCE1YKL011C YNR014WP53719 212 aa7.61□□□□□ -1.19
CCE1YKL011C MAK16P10962 306 aaPredicted RBP7.57□□□□□ -1.2
CCE1YKL011C FRA1Q07825 749 aa7.57□□□□□ -1.2
CCE1YKL011C AIM7Q12156 149 aa7.57□□□□□ -1.2
CCE1YKL011C WTM2Q12206 467 aa7.57□□□□□ -1.2
CCE1YKL011C YDR215CQ12240 137 aa7.57□□□□□ -1.2
CCE1YKL011C GPM1P00950 247 aaKnown RBP7.56□□□□□ -1.2
CCE1YKL011C AMN1P38285 549 aaPredicted RBP7.54□□□□□ -1.2
CCE1YKL011C AHP1P38013 176 aaKnown RBP7.53□□□□□ -1.2
CCE1YKL011C SLN1P39928 1220 aaPredicted RBP7.53□□□□□ -1.2
CCE1YKL011C STE20Q03497 939 aaKnown RBP7.53□□□□□ -1.2
CCE1YKL011C BOI2P39969 1040 aa7.52□□□□□ -1.21
CCE1YKL011C NAF1P53919 492 aaKnown RBP7.52□□□□□ -1.21
CCE1YKL011C SPT2P06843 333 aaPredicted RBP7.51□□□□□ -1.21
CCE1YKL011C MCA1Q08601 432 aa7.5□□□□□ -1.21
CCE1YKL011C UTR2P32623 467 aa7.48□□□□□ -1.21
CCE1YKL011C ISR1Q06098 443 aaKnown RBP7.48□□□□□ -1.21
CCE1YKL011C DAT1P13483 248 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms