RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W LSC2P53312 427 aa4.76□□□□□ -1.65
RPL40AYIL148W HST2P53686 357 aa4.76□□□□□ -1.65
RPL40AYIL148W ITT1Q04638 464 aa4.76□□□□□ -1.65
RPL40AYIL148W ARG82P07250 355 aa4.75□□□□□ -1.65
RPL40AYIL148W VAC17P25591 423 aa4.75□□□□□ -1.65
RPL40AYIL148W YJR098CP47139 656 aa4.75□□□□□ -1.65
RPL40AYIL148W UBP2Q01476 1272 aa4.75□□□□□ -1.65
RPL40AYIL148W SAS10Q12136 610 aaPredicted RBP4.74□□□□□ -1.65
RPL40AYIL148W MMP1Q12372 583 aa4.74□□□□□ -1.65
RPL40AYIL148W TCB1Q12466 1186 aa4.74□□□□□ -1.65
RPL40AYIL148W SPB4P25808 606 aaPredicted RBP4.73□□□□□ -1.65
RPL40AYIL148W ROG3P43602 733 aa4.73□□□□□ -1.65
RPL40AYIL148W APP1P53933 587 aa4.73□□□□□ -1.65
RPL40AYIL148W ESS1P22696 170 aa4.72□□□□□ -1.65
RPL40AYIL148W ICP55P40051 511 aa4.72□□□□□ -1.65
RPL40AYIL148W YPR204WQ08995 1032 aa4.72□□□□□ -1.65
RPL40AYIL148W CCP1P00431 361 aa4.71□□□□□ -1.66
RPL40AYIL148W YJU3P28321 313 aa4.71□□□□□ -1.66
RPL40AYIL148W OSH7P38755 437 aa4.71□□□□□ -1.66
RPL40AYIL148W TY1A-MR1Q04215 440 aa4.71□□□□□ -1.66
RPL40AYIL148W GLN1P32288 370 aaKnown RBP4.7□□□□□ -1.66
RPL40AYIL148W LSB3P43603 459 aaKnown RBP4.7□□□□□ -1.66
RPL40AYIL148W EMW1P42842 904 aaKnown RBP4.69□□□□□ -1.66
RPL40AYIL148W PUS1Q12211 544 aaKnown RBP4.69□□□□□ -1.66
RPL40AYIL148W MDJ1P35191 511 aa4.68□□□□□ -1.66
RPL40AYIL148W DPH6Q12429 685 aa4.68□□□□□ -1.66
RPL40AYIL148W RSC30P38781 883 aa4.67□□□□□ -1.66
RPL40AYIL148W LEO1P38439 464 aa4.65□□□□□ -1.67
RPL40AYIL148W LYS5P50113 272 aa4.64□□□□□ -1.67
RPL40AYIL148W ATF2P53296 535 aa4.64□□□□□ -1.67
RPL40AYIL148W NAM8Q00539 523 aaKnown RBP4.64□□□□□ -1.67
RPL40AYIL148W DFG5Q05031 458 aa4.64□□□□□ -1.67
RPL40AYIL148W PHM7Q12252 991 aa4.64□□□□□ -1.67
RPL40AYIL148W MKS1P34072 584 aa4.63□□□□□ -1.67
RPL40AYIL148W JJJ3P47138 172 aa4.63□□□□□ -1.67
RPL40AYIL148W KTR1P27810 393 aaKnown RBP4.62□□□□□ -1.67
RPL40AYIL148W FIG4P42837 879 aa4.62□□□□□ -1.67
RPL40AYIL148W CDC19P00549 500 aaKnown RBP4.61□□□□□ -1.67
RPL40AYIL148W NSG2P53898 299 aa4.61□□□□□ -1.67
RPL40AYIL148W PKH3Q03306 898 aaPredicted RBP4.61□□□□□ -1.67
RPL40AYIL148W LEU3P08638 886 aa4.6□□□□□ -1.67
RPL40AYIL148W ARG8P18544 423 aa4.59□□□□□ -1.67
RPL40AYIL148W YFL066CP43538 392 aa4.59□□□□□ -1.67
RPL40AYIL148W BDS1Q08347 646 aa4.59□□□□□ -1.67
RPL40AYIL148W GLC3P32775 704 aa4.58□□□□□ -1.68
RPL40AYIL148W THI72Q08579 599 aa4.58□□□□□ -1.68
RPL40AYIL148W FBP26P32604 452 aa4.57□□□□□ -1.68
RPL40AYIL148W STE6P12866 1290 aa4.56□□□□□ -1.68
RPL40AYIL148W CUZ1P53899 274 aa4.56□□□□□ -1.68
RPL40AYIL148W CCT8P47079 568 aaKnown RBP4.55□□□□□ -1.68
RPL40AYIL148W NRD1P53617 575 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
RPL40AYIL148W YPR084WQ06821 456 aa4.55□□□□□ -1.68
RPL40AYIL148W AI1P03875 834 aa4.54□□□□□ -1.68
RPL40AYIL148W TEC1P18412 486 aa4.54□□□□□ -1.68
RPL40AYIL148W VTC4P47075 721 aa4.54□□□□□ -1.68
RPL40AYIL148W YNR021WP53723 404 aaKnown RBP4.53□□□□□ -1.68
RPL40AYIL148W TAF7Q05021 590 aa4.53□□□□□ -1.68
RPL40AYIL148W RPN1P38764 993 aaKnown RBP4.52□□□□□ -1.69
RPL40AYIL148W DAL1P32375 460 aa4.51□□□□□ -1.69
RPL40AYIL148W CEM1P39525 442 aa4.51□□□□□ -1.69
RPL40AYIL148W CSN12P47130 423 aa4.51□□□□□ -1.69
RPL40AYIL148W RAD59Q12223 238 aa4.51□□□□□ -1.69
RPL40AYIL148W ISU1Q03020 165 aa4.5□□□□□ -1.69
RPL40AYIL148W YPR053CQ6Q5F3 151 aa4.49□□□□□ -1.69
RPL40AYIL148W SBE2P42223 864 aaKnown RBP4.48□□□□□ -1.69
RPL40AYIL148W SYT1Q06836 1226 aa4.48□□□□□ -1.69
RPL40AYIL148W ATG20Q07528 640 aa4.48□□□□□ -1.69
RPL40AYIL148W DIT1P21623 536 aa4.47□□□□□ -1.69
RPL40AYIL148W YMR265CQ03508 461 aaKnown RBP4.47□□□□□ -1.69
RPL40AYIL148W GUT2P32191 649 aa4.46□□□□□ -1.7
RPL40AYIL148W SKN7P38889 622 aa4.46□□□□□ -1.7
RPL40AYIL148W DLD3P39976 496 aaKnown RBP4.46□□□□□ -1.7
RPL40AYIL148W UBP15P50101 1230 aa4.46□□□□□ -1.7
RPL40AYIL148W TDA6Q06466 467 aa4.46□□□□□ -1.7
RPL40AYIL148W TY1A-DR3Q12441 440 aa4.46□□□□□ -1.7
RPL40AYIL148W SBP1P10080 294 aaKnown RBP4.45□□□□□ -1.7
RPL40AYIL148W SLA1P32790 1244 aa4.45□□□□□ -1.7
RPL40AYIL148W KRE33P53914 1056 aaKnown RBP4.45□□□□□ -1.7
RPL40AYIL148W ADE12P80210 433 aaKnown RBP4.45□□□□□ -1.7
RPL40AYIL148W AIM7Q12156 149 aa4.45□□□□□ -1.7
RPL40AYIL148W SSN3P39073 555 aa4.44□□□□□ -1.7
RPL40AYIL148W YMR187CQ03236 431 aa4.44□□□□□ -1.7
RPL40AYIL148W MAK16P10962 306 aaPredicted RBP4.43□□□□□ -1.7
RPL40AYIL148W FRA1Q07825 749 aa4.43□□□□□ -1.7
RPL40AYIL148W WTM2Q12206 467 aa4.43□□□□□ -1.7
RPL40AYIL148W MSN5P52918 1224 aa4.42□□□□□ -1.7
RPL40AYIL148W YDR461C-AQ2V2P7 80 aa4.42□□□□□ -1.7
RPL40AYIL148W RPP2BP02400 110 aaKnown RBP4.41□□□□□ -1.7
RPL40AYIL148W STE20Q03497 939 aaKnown RBP4.41□□□□□ -1.7
RPL40AYIL148W HGH1P48362 394 aaKnown RBP4.4□□□□□ -1.71
RPL40AYIL148W YNR014WP53719 212 aa4.4□□□□□ -1.71
RPL40AYIL148W YCK2P23292 546 aaKnown RBP4.39□□□□□ -1.71
RPL40AYIL148W NAF1P53919 492 aaKnown RBP4.39□□□□□ -1.71
RPL40AYIL148W DAT1P13483 248 aaKnown RBP4.38□□□□□ -1.71
RPL40AYIL148W AHP1P38013 176 aaKnown RBP4.38□□□□□ -1.71
RPL40AYIL148W MCX1P38323 520 aaPredicted RBP4.38□□□□□ -1.71
RPL40AYIL148W ISR1Q06098 443 aaKnown RBP4.38□□□□□ -1.71
RPL40AYIL148W GPM1P00950 247 aaKnown RBP4.37□□□□□ -1.71
RPL40AYIL148W UTP7P40055 554 aaKnown RBP4.37□□□□□ -1.71
RPL40AYIL148W SPT2P06843 333 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms