RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	YML083C	Q04526	418 aa		5.31	□□□□□ -1.56
NDC80	YIL144W	PAC1	P39946	494 aa	Known RBP	5.3	□□□□□ -1.56
NDC80	YIL144W	ISF1	P32488	338 aa		5.29	□□□□□ -1.56
NDC80	YIL144W	PEP12	P32854	288 aa		5.29	□□□□□ -1.56
NDC80	YIL144W	AIR1	P40507	360 aa	Known RBP	5.29	□□□□□ -1.56
NDC80	YIL144W	NAF1	P53919	492 aa	Known RBP	5.29	□□□□□ -1.56
NDC80	YIL144W	MCM16	Q12262	181 aa		5.28	□□□□□ -1.56
NDC80	YIL144W	YPR084W	Q06821	456 aa		5.28	□□□□□ -1.56
NDC80	YIL144W	RPA14	P50106	137 aa		5.27	□□□□□ -1.57
NDC80	YIL144W	TBF1	Q02457	562 aa		5.27	□□□□□ -1.57
NDC80	YIL144W	MET22	P32179	357 aa		5.27	□□□□□ -1.57
NDC80	YIL144W	YML020W	Q03722	664 aa		5.27	□□□□□ -1.57
NDC80	YIL144W	YPR097W	Q06839	1073 aa		5.27	□□□□□ -1.57
NDC80	YIL144W	PDC1	P06169	563 aa	Known RBP	5.26	□□□□□ -1.57
NDC80	YIL144W	TGL4	P36165	910 aa		5.26	□□□□□ -1.57
NDC80	YIL144W	SLX8	P40072	274 aa		5.26	□□□□□ -1.57
NDC80	YIL144W	PRT1	P06103	763 aa	Known RBP	5.25	□□□□□ -1.57
NDC80	YIL144W	RRN7	P40992	514 aa		5.25	□□□□□ -1.57
NDC80	YIL144W	FIG4	P42837	879 aa		5.25	□□□□□ -1.57
NDC80	YIL144W	EMP47	P43555	445 aa		5.25	□□□□□ -1.57
NDC80	YIL144W	NOP8	Q08287	484 aa	Predicted RBP	5.25	□□□□□ -1.57
NDC80	YIL144W	ENV9	Q08651	330 aa		5.24	□□□□□ -1.57
NDC80	YIL144W	CLA4	P48562	842 aa		5.24	□□□□□ -1.57
NDC80	YIL144W	APL6	P46682	809 aa		5.23	□□□□□ -1.57
NDC80	YIL144W	FRA1	Q07825	749 aa		5.23	□□□□□ -1.57
NDC80	YIL144W	MOD5	P07884	428 aa		5.22	□□□□□ -1.57
NDC80	YIL144W	ALR1	Q08269	859 aa		5.22	□□□□□ -1.57
NDC80	YIL144W	HXT10	P43581	546 aa		5.22	□□□□□ -1.57
NDC80	YIL144W	ITT1	Q04638	464 aa		5.22	□□□□□ -1.57
NDC80	YIL144W	TEC1	P18412	486 aa		5.21	□□□□□ -1.58
NDC80	YIL144W	SIS2	P36024	562 aa		5.21	□□□□□ -1.58
NDC80	YIL144W	YPP1	P46951	817 aa		5.21	□□□□□ -1.58
NDC80	YIL144W	KTR7	P40504	517 aa		5.2	□□□□□ -1.58
NDC80	YIL144W	ECM23	Q02710	187 aa		5.2	□□□□□ -1.58
NDC80	YIL144W	MTC5	Q03897	1148 aa		5.2	□□□□□ -1.58
NDC80	YIL144W	VAC17	P25591	423 aa		5.19	□□□□□ -1.58
NDC80	YIL144W	TPD3	P31383	635 aa		5.19	□□□□□ -1.58
NDC80	YIL144W	RRD1	P40454	393 aa	Known RBP	5.19	□□□□□ -1.58
NDC80	YIL144W	STE20	Q03497	939 aa	Known RBP	5.19	□□□□□ -1.58
NDC80	YIL144W	CST6	P40535	587 aa		5.18	□□□□□ -1.58
NDC80	YIL144W	RPL34A	P87262	121 aa	Predicted RBP	5.18	□□□□□ -1.58
NDC80	YIL144W	GUT2	P32191	649 aa		5.17	□□□□□ -1.58
NDC80	YIL144W	KXD1	P53158	218 aa		5.17	□□□□□ -1.58
NDC80	YIL144W	GAL2	P13181	574 aa		5.17	□□□□□ -1.58
NDC80	YIL144W	TPS3	P38426	1054 aa	Known RBP	5.17	□□□□□ -1.58
NDC80	YIL144W	SPT16	P32558	1035 aa	Known RBP	5.16	□□□□□ -1.58
NDC80	YIL144W	HAL5	P38970	855 aa	Known RBP	5.16	□□□□□ -1.58
NDC80	YIL144W	YDR444W	Q04093	687 aa		5.16	□□□□□ -1.58
NDC80	YIL144W	CDC4	P07834	779 aa		5.16	□□□□□ -1.58
NDC80	YIL144W	CDC3	P32457	520 aa	Known RBP	5.16	□□□□□ -1.58
NDC80	YIL144W	SOH1	P38633	127 aa		5.16	□□□□□ -1.58
NDC80	YIL144W	YDL176W	Q12027	708 aa		5.16	□□□□□ -1.58
NDC80	YIL144W	UBX7	P38349	436 aa		5.15	□□□□□ -1.59
NDC80	YIL144W	PAT1	P25644	796 aa	Known RBP	5.14	□□□□□ -1.59
NDC80	YIL144W	IXR1	P33417	597 aa		5.14	□□□□□ -1.59
NDC80	YIL144W	MRX12	P47084	519 aa		5.14	□□□□□ -1.59
NDC80	YIL144W	ACS2	P52910	683 aa	Known RBP	5.14	□□□□□ -1.59
NDC80	YIL144W	ROM1	P53046	1155 aa		5.14	□□□□□ -1.59
NDC80	YIL144W	HAT1	Q12341	374 aa		5.13	□□□□□ -1.59
NDC80	YIL144W	SSF1	P38789	453 aa	Predicted RBP	5.12	□□□□□ -1.59
NDC80	YIL144W	CWC15	Q03772	175 aa	Known RBP	5.12	□□□□□ -1.59
NDC80	YIL144W	UTP13	Q05946	817 aa	Known RBP	5.12	□□□□□ -1.59
NDC80	YIL144W	SEN54	Q02825	467 aa	Predicted RBP	5.12	□□□□□ -1.59
NDC80	YIL144W	PUS5	Q06244	254 aa		5.12	□□□□□ -1.59
NDC80	YIL144W	PHO87	P25360	923 aa		5.11	□□□□□ -1.59
NDC80	YIL144W	BDP1	P46678	594 aa		5.11	□□□□□ -1.59
NDC80	YIL144W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
NDC80	YIL144W	ISR1	Q06098	443 aa	Known RBP	5.11	□□□□□ -1.59
NDC80	YIL144W	PDI1	P17967	522 aa	Known RBP	5.1	□□□□□ -1.59
NDC80	YIL144W	TSC13	Q99190	310 aa		5.1	□□□□□ -1.59
NDC80	YIL144W	LCB5	Q06147	687 aa	Known RBP	5.09	□□□□□ -1.59
NDC80	YIL144W	APP1	P53933	587 aa		5.09	□□□□□ -1.59
NDC80	YIL144W	HDA3	Q06623	655 aa		5.09	□□□□□ -1.59
NDC80	YIL144W	TRL1	P09880	827 aa	Known RBP	5.08	□□□□□ -1.6
NDC80	YIL144W	ATG20	Q07528	640 aa		5.08	□□□□□ -1.6
NDC80	YIL144W	HAP4	P14064	554 aa		5.08	□□□□□ -1.6
NDC80	YIL144W	MIP1	P15801	1254 aa		5.08	□□□□□ -1.6
NDC80	YIL144W	ATG3	P40344	310 aa		5.08	□□□□□ -1.6
NDC80	YIL144W	EMW1	P42842	904 aa	Known RBP	5.08	□□□□□ -1.6
NDC80	YIL144W	SUV3	P32580	737 aa		5.06	□□□□□ -1.6
NDC80	YIL144W	FRK1	Q03002	865 aa	Predicted RBP	5.06	□□□□□ -1.6
NDC80	YIL144W	KIP2	P28743	706 aa		5.06	□□□□□ -1.6
NDC80	YIL144W	ERP5	P38819	212 aa		5.06	□□□□□ -1.6
NDC80	YIL144W	BOL3	P39724	118 aa		5.06	□□□□□ -1.6
NDC80	YIL144W	AIM9	P40053	627 aa	Known RBP	5.06	□□□□□ -1.6
NDC80	YIL144W	YBL113C	Q7M4S9	792 aa		5.06	□□□□□ -1.6
NDC80	YIL144W	PUF6	Q04373	656 aa	Known RBP	5.05	□□□□□ -1.6
NDC80	YIL144W	GAS4	Q08271	471 aa		5.05	□□□□□ -1.6
NDC80	YIL144W	IPL1	P38991	367 aa		5.04	□□□□□ -1.6
NDC80	YIL144W	MDJ2	P42834	146 aa		5.04	□□□□□ -1.6
NDC80	YIL144W	SYH1	Q02875	849 aa	Known RBP	5.04	□□□□□ -1.6
NDC80	YIL144W	PNP1	Q05788	311 aa		5.04	□□□□□ -1.6
NDC80	YIL144W	NTH2	P35172	780 aa		5.03	□□□□□ -1.6
NDC80	YIL144W	ISU1	Q03020	165 aa		5.03	□□□□□ -1.6
NDC80	YIL144W	KAR5	Q04746	504 aa		5.03	□□□□□ -1.6
NDC80	YIL144W	PUN1	Q06991	263 aa		5.03	□□□□□ -1.6
NDC80	YIL144W	SWI5	P08153	709 aa		5.02	□□□□□ -1.61
NDC80	YIL144W	MRT4	P33201	236 aa	Known RBP	5.02	□□□□□ -1.61
NDC80	YIL144W	SLD2	P34252	453 aa		5.02	□□□□□ -1.61
NDC80	YIL144W	SRS2	P12954	1174 aa		5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms