RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C TCB1Q12466 1186 aa9.53□□□□□ -0.88
SNP1YIL061C EDE1P34216 1381 aa9.52□□□□□ -0.88
SNP1YIL061C HSP104P31539 908 aaKnown RBP9.52□□□□□ -0.89
SNP1YIL061C AOS1Q06624 347 aa9.52□□□□□ -0.89
SNP1YIL061C RRT14P40470 206 aa9.51□□□□□ -0.89
SNP1YIL061C XKS1P42826 600 aa9.51□□□□□ -0.89
SNP1YIL061C YFR016CP43597 1233 aaKnown RBP9.51□□□□□ -0.89
SNP1YIL061C RCR1P38212 213 aa9.5□□□□□ -0.89
SNP1YIL061C POL32P47110 350 aa9.5□□□□□ -0.89
SNP1YIL061C RSF2P46974 1380 aa9.5□□□□□ -0.89
SNP1YIL061C RPC31P17890 251 aa9.49□□□□□ -0.89
SNP1YIL061C SRT1Q03175 343 aa9.48□□□□□ -0.89
SNP1YIL061C REB1P21538 810 aa9.46□□□□□ -0.9
SNP1YIL061C UGA3P26370 528 aa9.46□□□□□ -0.9
SNP1YIL061C INP54Q08227 384 aaKnown RBP9.46□□□□□ -0.9
SNP1YIL061C BMS1Q08965 1183 aaKnown RBP9.46□□□□□ -0.9
SNP1YIL061C LYS2P07702 1392 aa9.46□□□□□ -0.9
SNP1YIL061C COQ4O13525 335 aa9.45□□□□□ -0.9
SNP1YIL061C KCC4P25389 1037 aa9.45□□□□□ -0.9
SNP1YIL061C ENT1Q12518 454 aa9.45□□□□□ -0.9
SNP1YIL061C NUP145P49687 1317 aa9.45□□□□□ -0.9
SNP1YIL061C YPP1P46951 817 aa9.44□□□□□ -0.9
SNP1YIL061C NSE3Q05541 303 aa9.44□□□□□ -0.9
SNP1YIL061C TRP5P00931 707 aaKnown RBP9.43□□□□□ -0.9
SNP1YIL061C PUF6Q04373 656 aaKnown RBP9.43□□□□□ -0.9
SNP1YIL061C TSR3Q12094 313 aaKnown RBP9.43□□□□□ -0.9
SNP1YIL061C YAH1Q12184 172 aaKnown RBP9.42□□□□□ -0.9
SNP1YIL061C YBR287WP38355 427 aa9.41□□□□□ -0.9
SNP1YIL061C IES2P40154 320 aa9.41□□□□□ -0.9
SNP1YIL061C ENV9Q08651 330 aa9.41□□□□□ -0.9
SNP1YIL061C RPS19AP07280 144 aaKnown RBP9.4□□□□□ -0.9
SNP1YIL061C RPS19BP07281 144 aaPredicted RBP9.4□□□□□ -0.9
SNP1YIL061C MEC3Q02574 474 aa9.4□□□□□ -0.9
SNP1YIL061C CSI1Q04368 295 aa9.4□□□□□ -0.9
SNP1YIL061C YOL057WQ08225 711 aa9.4□□□□□ -0.9
SNP1YIL061C YRF1-3P0CX14 1859 aa9.39□□□□□ -0.91
SNP1YIL061C YRF1-7P0CX15 1859 aa9.39□□□□□ -0.91
SNP1YIL061C YRF1-6P53819 1859 aa9.39□□□□□ -0.91
SNP1YIL061C YIR014WP40570 242 aa9.39□□□□□ -0.91
SNP1YIL061C ADE16P54113 591 aaKnown RBP9.39□□□□□ -0.91
SNP1YIL061C OSM1P21375 501 aaKnown RBP9.38□□□□□ -0.91
SNP1YIL061C ILV3P39522 585 aaKnown RBP9.37□□□□□ -0.91
SNP1YIL061C APP1P53933 587 aa9.37□□□□□ -0.91
SNP1YIL061C YDR306CQ06640 478 aa9.37□□□□□ -0.91
SNP1YIL061C RAD4P14736 754 aa9.36□□□□□ -0.91
SNP1YIL061C YKL133CP36066 463 aa9.36□□□□□ -0.91
SNP1YIL061C YNG2P38806 282 aaKnown RBP9.36□□□□□ -0.91
SNP1YIL061C OPY1P38271 328 aa9.35□□□□□ -0.91
SNP1YIL061C ALE1Q08548 619 aa9.35□□□□□ -0.91
SNP1YIL061C MRP7P12687 371 aa9.34□□□□□ -0.91
SNP1YIL061C RAD24P32641 659 aa9.34□□□□□ -0.91
SNP1YIL061C ECM16Q04217 1267 aaKnown RBP9.34□□□□□ -0.91
SNP1YIL061C ROM2P51862 1356 aaKnown RBP9.34□□□□□ -0.91
SNP1YIL061C SPO1P53541 631 aa9.33□□□□□ -0.92
SNP1YIL061C FRK1Q03002 865 aaPredicted RBP9.33□□□□□ -0.92
SNP1YIL061C IMH1Q06704 911 aaKnown RBP9.33□□□□□ -0.92
SNP1YIL061C YJR008WP47085 338 aa9.32□□□□□ -0.92
SNP1YIL061C YGR122WP53272 402 aa9.32□□□□□ -0.92
SNP1YIL061C DNM1P54861 757 aa9.32□□□□□ -0.92
SNP1YIL061C NOP8Q08287 484 aaPredicted RBP9.32□□□□□ -0.92
SNP1YIL061C GCD7P32502 381 aaPredicted RBP9.31□□□□□ -0.92
SNP1YIL061C BOI2P39969 1040 aa9.31□□□□□ -0.92
SNP1YIL061C HGH1P48362 394 aaKnown RBP9.31□□□□□ -0.92
SNP1YIL061C ATG13Q06628 738 aa9.31□□□□□ -0.92
SNP1YIL061C IME2P32581 645 aa9.3□□□□□ -0.92
SNP1YIL061C YBP2P53169 641 aa9.3□□□□□ -0.92
SNP1YIL061C ZDS2P54786 942 aa9.3□□□□□ -0.92
SNP1YIL061C RMT2Q03305 412 aa9.3□□□□□ -0.92
SNP1YIL061C CST6P40535 587 aa9.29□□□□□ -0.92
SNP1YIL061C NMD2P38798 1089 aaKnown RBP9.28□□□□□ -0.92
SNP1YIL061C DOT5P40553 215 aa9.28□□□□□ -0.92
SNP1YIL061C NKP2Q06162 153 aa9.28□□□□□ -0.92
SNP1YIL061C SWI1P09547 1314 aa9.28□□□□□ -0.92
SNP1YIL061C SWC3P31376 625 aa9.27□□□□□ -0.93
SNP1YIL061C FOX2Q02207 900 aaKnown RBP9.27□□□□□ -0.93
SNP1YIL061C RAD50P12753 1312 aa9.27□□□□□ -0.93
SNP1YIL061C CDC16P09798 840 aa9.26□□□□□ -0.93
SNP1YIL061C NUP133P36161 1157 aa9.26□□□□□ -0.93
SNP1YIL061C TUM1Q08686 304 aaKnown RBP9.26□□□□□ -0.93
SNP1YIL061C NOP53Q12080 455 aaKnown RBP9.26□□□□□ -0.93
SNP1YIL061C COBP00163 385 aa9.25□□□□□ -0.93
SNP1YIL061C SSP2Q08646 371 aa9.25□□□□□ -0.93
SNP1YIL061C GRX1P25373 110 aaKnown RBP9.24□□□□□ -0.93
SNP1YIL061C YKR075CP36155 307 aa9.24□□□□□ -0.93
SNP1YIL061C RFC1P38630 861 aaKnown RBP9.24□□□□□ -0.93
SNP1YIL061C SET1P38827 1080 aaKnown RBP9.24□□□□□ -0.93
SNP1YIL061C MDG1P53885 366 aa9.23□□□□□ -0.93
SNP1YIL061C YPR204WQ08995 1032 aa9.23□□□□□ -0.93
SNP1YIL061C PHM7Q12252 991 aa9.23□□□□□ -0.93
SNP1YIL061C LPD1P09624 499 aaKnown RBP9.22□□□□□ -0.93
SNP1YIL061C UBP12P39538 1254 aa9.22□□□□□ -0.93
SNP1YIL061C YLR271WQ06152 274 aa9.22□□□□□ -0.93
SNP1YIL061C PCT1P13259 424 aa9.21□□□□□ -0.94
SNP1YIL061C ARG8P18544 423 aa9.21□□□□□ -0.94
SNP1YIL061C APL2P36000 726 aaPredicted RBP9.21□□□□□ -0.94
SNP1YIL061C GCR2Q01722 534 aa9.21□□□□□ -0.94
SNP1YIL061C VPS64Q03944 604 aa9.21□□□□□ -0.94
SNP1YIL061C YIL055CP40523 627 aaKnown RBP9.2□□□□□ -0.94
SNP1YIL061C DCD1P06773 312 aa9.18□□□□□ -0.94
SNP1YIL061C DLD1P32891 587 aa9.18□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms