RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W NSE3Q05541 303 aa17.42■□□□□ 0.38
RPN10YHR200W INP54Q08227 384 aaKnown RBP17.42■□□□□ 0.38
RPN10YHR200W KCC4P25389 1037 aa17.41■□□□□ 0.38
RPN10YHR200W GYP7P48365 746 aa17.41■□□□□ 0.38
RPN10YHR200W MAK21Q12176 1025 aaKnown RBP17.41■□□□□ 0.38
RPN10YHR200W NAB6Q03735 1134 aaKnown RBP RIP-Chip data17.4■□□□□ 0.38not detected
RPN10YHR200W ATG13Q06628 738 aa17.4■□□□□ 0.38
RPN10YHR200W EDE1P34216 1381 aa17.4■□□□□ 0.38
RPN10YHR200W ADE16P54113 591 aaKnown RBP17.38■□□□□ 0.37
RPN10YHR200W NUP145P49687 1317 aa17.38■□□□□ 0.37
RPN10YHR200W FRK1Q03002 865 aaPredicted RBP17.36■□□□□ 0.37
RPN10YHR200W YRF1-3P0CX14 1859 aa17.35■□□□□ 0.37
RPN10YHR200W YRF1-7P0CX15 1859 aa17.35■□□□□ 0.37
RPN10YHR200W YRF1-6P53819 1859 aa17.35■□□□□ 0.37
RPN10YHR200W PRI1P10363 409 aa17.35■□□□□ 0.37
RPN10YHR200W RRT14P40470 206 aa17.35■□□□□ 0.37
RPN10YHR200W LYS2P07702 1392 aa17.35■□□□□ 0.37
RPN10YHR200W DOT5P40553 215 aa17.34■□□□□ 0.37
RPN10YHR200W BUD27P43573 796 aaKnown RBP RIP-Chip data17.34■□□□□ 0.37not detected
RPN10YHR200W LAM6Q08001 693 aa17.34■□□□□ 0.37
RPN10YHR200W RAD2P07276 1031 aa17.33■□□□□ 0.36
RPN10YHR200W OSM1P21375 501 aaKnown RBP17.32■□□□□ 0.36
RPN10YHR200W FOX2Q02207 900 aaKnown RBP17.32■□□□□ 0.36
RPN10YHR200W BUD31P25337 157 aaPredicted RBP17.3■□□□□ 0.36
RPN10YHR200W PRP40P33203 583 aaKnown RBP17.3■□□□□ 0.36
RPN10YHR200W YJL181WP46987 611 aa17.3■□□□□ 0.36
RPN10YHR200W BMS1Q08965 1183 aaKnown RBP17.3■□□□□ 0.36
RPN10YHR200W COBP00163 385 aa17.29■□□□□ 0.36
RPN10YHR200W YBP2P53169 641 aa17.29■□□□□ 0.36
RPN10YHR200W FPR3P38911 411 aaKnown RBP17.28■□□□□ 0.36
RPN10YHR200W RMT2Q03305 412 aa17.25■□□□□ 0.35
RPN10YHR200W COQ4O13525 335 aa17.24■□□□□ 0.35
RPN10YHR200W UBP1P25037 809 aa17.24■□□□□ 0.35
RPN10YHR200W SRT1Q03175 343 aa17.24■□□□□ 0.35
RPN10YHR200W GRX1P25373 110 aaKnown RBP17.23■□□□□ 0.35
RPN10YHR200W YBR287WP38355 427 aa17.23■□□□□ 0.35
RPN10YHR200W YIL092WP40497 633 aa17.22■□□□□ 0.35
RPN10YHR200W ALE1Q08548 619 aa17.22■□□□□ 0.35
RPN10YHR200W YKR075CP36155 307 aa17.21■□□□□ 0.35
RPN10YHR200W FUN12P39730 1002 aaKnown RBP17.21■□□□□ 0.35
RPN10YHR200W DAL5P15365 543 aa17.2■□□□□ 0.34
RPN10YHR200W RPN11P43588 306 aaKnown RBP17.2■□□□□ 0.34
RPN10YHR200W MDG1P53885 366 aa17.2■□□□□ 0.34
RPN10YHR200W YOL057WQ08225 711 aa17.19■□□□□ 0.34
RPN10YHR200W NOP2P40991 618 aaKnown RBP17.18■□□□□ 0.34
RPN10YHR200W TFA1P36100 482 aa17.17■□□□□ 0.34
RPN10YHR200W RAD4P14736 754 aa17.16■□□□□ 0.34
RPN10YHR200W SSP2Q08646 371 aa17.15■□□□□ 0.34
RPN10YHR200W NOP53Q12080 455 aaKnown RBP17.15■□□□□ 0.34
RPN10YHR200W YPP1P46951 817 aa17.14■□□□□ 0.33
RPN10YHR200W NOP8Q08287 484 aaPredicted RBP17.14■□□□□ 0.33
RPN10YHR200W MSB4Q12317 492 aa17.13■□□□□ 0.33
RPN10YHR200W DNM1P54861 757 aa17.11■□□□□ 0.33
RPN10YHR200W MRP7P12687 371 aa17.08■□□□□ 0.32
RPN10YHR200W RIM15P43565 1770 aa17.07■□□□□ 0.32
RPN10YHR200W PHM7Q12252 991 aa17.07■□□□□ 0.32
RPN10YHR200W NPR2P39923 615 aa17.05■□□□□ 0.32
RPN10YHR200W CST6P40535 587 aa17.05■□□□□ 0.32
RPN10YHR200W POL32P47110 350 aa17.05■□□□□ 0.32
RPN10YHR200W YDR306CQ06640 478 aa17.05■□□□□ 0.32
RPN10YHR200W RPS19AP07280 144 aaKnown RBP17.04■□□□□ 0.32
RPN10YHR200W RPS19BP07281 144 aaPredicted RBP17.04■□□□□ 0.32
RPN10YHR200W TUM1Q08686 304 aaKnown RBP17.04■□□□□ 0.32
RPN10YHR200W TRP5P00931 707 aaKnown RBP17.03■□□□□ 0.32
RPN10YHR200W CSI1Q04368 295 aa17.03■□□□□ 0.32
RPN10YHR200W GRE2Q12068 342 aaKnown RBP17.02■□□□□ 0.32
RPN10YHR200W VPS64Q03944 604 aa17.01■□□□□ 0.31
RPN10YHR200W PUF6Q04373 656 aaKnown RBP17.01■□□□□ 0.31
RPN10YHR200W NUP133P36161 1157 aa16.99■□□□□ 0.31
RPN10YHR200W YNG2P38806 282 aaKnown RBP16.99■□□□□ 0.31
RPN10YHR200W TEA1P47988 759 aa16.99■□□□□ 0.31
RPN10YHR200W ZDS2P54786 942 aa16.99■□□□□ 0.31
RPN10YHR200W BUG1Q12191 341 aa16.99■□□□□ 0.31
RPN10YHR200W YBL086CP38177 466 aa16.98■□□□□ 0.31
RPN10YHR200W YJR008WP47085 338 aa16.97■□□□□ 0.31
RPN10YHR200W HGH1P48362 394 aaKnown RBP16.97■□□□□ 0.31
RPN10YHR200W RAD24P32641 659 aa16.96■□□□□ 0.31
RPN10YHR200W BDF1P35817 686 aa16.96■□□□□ 0.31
RPN10YHR200W GTT3P39996 337 aa16.96■□□□□ 0.31
RPN10YHR200W SWI1P09547 1314 aa16.96■□□□□ 0.3
RPN10YHR200W LYS4P49367 693 aaPredicted RBP16.95■□□□□ 0.3
RPN10YHR200W YLR271WQ06152 274 aa16.95■□□□□ 0.3
RPN10YHR200W ALD2P47771 506 aa16.94■□□□□ 0.3
RPN10YHR200W SER1P33330 395 aaKnown RBP16.93■□□□□ 0.3
RPN10YHR200W BOI2P39969 1040 aa16.93■□□□□ 0.3
RPN10YHR200W PKH1Q03407 766 aa16.93■□□□□ 0.3
RPN10YHR200W UTP22P53254 1237 aaPredicted RBP16.92■□□□□ 0.3
RPN10YHR200W SPO1P53541 631 aa16.92■□□□□ 0.3
RPN10YHR200W ECM16Q04217 1267 aaKnown RBP16.92■□□□□ 0.3
RPN10YHR200W YPR204WQ08995 1032 aa16.92■□□□□ 0.3
RPN10YHR200W NYV1Q12255 253 aa16.91■□□□□ 0.3
RPN10YHR200W APL2P36000 726 aaPredicted RBP16.9■□□□□ 0.3
RPN10YHR200W UGA2P38067 497 aa16.9■□□□□ 0.3
RPN10YHR200W YGL082WP53155 381 aa16.9■□□□□ 0.3
RPN10YHR200W YGR122WP53272 402 aa16.9■□□□□ 0.3
RPN10YHR200W SUP35P05453 685 aaKnown RBP16.89■□□□□ 0.29
RPN10YHR200W ARG8P18544 423 aa16.89■□□□□ 0.29
RPN10YHR200W ALD3P54114 506 aa16.89■□□□□ 0.29
RPN10YHR200W SET1P38827 1080 aaKnown RBP16.87■□□□□ 0.29
RPN10YHR200W SWC3P31376 625 aa16.85■□□□□ 0.29
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms