RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C RRT14P40470 206 aa16.07■□□□□ 0.16
PHO4YFR034C ENT1Q12518 454 aa16.07■□□□□ 0.16
PHO4YFR034C EDE1P34216 1381 aa16.06■□□□□ 0.16
PHO4YFR034C INP54Q08227 384 aaKnown RBP16■□□□□ 0.15
PHO4YFR034C ENV9Q08651 330 aa16■□□□□ 0.15
PHO4YFR034C NUP145P49687 1317 aa15.99■□□□□ 0.15
PHO4YFR034C SRT1Q03175 343 aa15.99■□□□□ 0.15
PHO4YFR034C BMS1Q08965 1183 aaKnown RBP15.99■□□□□ 0.15
PHO4YFR034C YAH1Q12184 172 aaKnown RBP15.99■□□□□ 0.15
PHO4YFR034C LYS2P07702 1392 aa15.99■□□□□ 0.15
PHO4YFR034C KCC4P25389 1037 aa15.98■□□□□ 0.15
PHO4YFR034C UGA3P26370 528 aa15.98■□□□□ 0.15
PHO4YFR034C YBR287WP38355 427 aa15.98■□□□□ 0.15
PHO4YFR034C IES2P40154 320 aa15.98■□□□□ 0.15
PHO4YFR034C POL32P47110 350 aa15.98■□□□□ 0.15
PHO4YFR034C APP1P53933 587 aa15.98■□□□□ 0.15
PHO4YFR034C YFR016CP43597 1233 aaKnown RBP15.97■□□□□ 0.15
PHO4YFR034C NSE3Q05541 303 aa15.97■□□□□ 0.15
PHO4YFR034C COQ4O13525 335 aa15.96■□□□□ 0.15
PHO4YFR034C MEC3Q02574 474 aa15.94■□□□□ 0.14
PHO4YFR034C RPC31P17890 251 aa15.93■□□□□ 0.14
PHO4YFR034C ADE16P54113 591 aaKnown RBP15.92■□□□□ 0.14
PHO4YFR034C TRP5P00931 707 aaKnown RBP15.91■□□□□ 0.14
PHO4YFR034C PUF6Q04373 656 aaKnown RBP15.91■□□□□ 0.14
PHO4YFR034C YPP1P46951 817 aa15.9■□□□□ 0.14
PHO4YFR034C IMH1Q06704 911 aaKnown RBP15.9■□□□□ 0.14
PHO4YFR034C YKL133CP36066 463 aa15.89■□□□□ 0.13
PHO4YFR034C ROM2P51862 1356 aaKnown RBP15.88■□□□□ 0.13
PHO4YFR034C FRK1Q03002 865 aaPredicted RBP15.86■□□□□ 0.13
PHO4YFR034C ALE1Q08548 619 aa15.86■□□□□ 0.13
PHO4YFR034C RIM15P43565 1770 aa15.85■□□□□ 0.13
PHO4YFR034C OSM1P21375 501 aaKnown RBP15.85■□□□□ 0.13
PHO4YFR034C CSI1Q04368 295 aa15.85■□□□□ 0.13
PHO4YFR034C YOL057WQ08225 711 aa15.85■□□□□ 0.13
PHO4YFR034C RAD4P14736 754 aa15.83■□□□□ 0.12
PHO4YFR034C ATG13Q06628 738 aa15.83■□□□□ 0.12
PHO4YFR034C RPS19AP07280 144 aaKnown RBP15.81■□□□□ 0.12
PHO4YFR034C RPS19BP07281 144 aaPredicted RBP15.81■□□□□ 0.12
PHO4YFR034C MRP7P12687 371 aa15.79■□□□□ 0.12
PHO4YFR034C YNG2P38806 282 aaKnown RBP15.79■□□□□ 0.12
PHO4YFR034C ILV3P39522 585 aaKnown RBP15.79■□□□□ 0.12
PHO4YFR034C RAD24P32641 659 aa15.78■□□□□ 0.12
PHO4YFR034C YBP2P53169 641 aa15.78■□□□□ 0.12
PHO4YFR034C NOP8Q08287 484 aaPredicted RBP15.78■□□□□ 0.12
PHO4YFR034C SPO1P53541 631 aa15.77■□□□□ 0.12
PHO4YFR034C YDR306CQ06640 478 aa15.77■□□□□ 0.12
PHO4YFR034C YGR122WP53272 402 aa15.76■□□□□ 0.11
PHO4YFR034C RMT2Q03305 412 aa15.76■□□□□ 0.11
PHO4YFR034C DOT5P40553 215 aa15.74■□□□□ 0.11
PHO4YFR034C ZDS2P54786 942 aa15.74■□□□□ 0.11
PHO4YFR034C FOX2Q02207 900 aaKnown RBP15.74■□□□□ 0.11
PHO4YFR034C COBP00163 385 aa15.73■□□□□ 0.11
PHO4YFR034C DNM1P54861 757 aa15.72■□□□□ 0.11
PHO4YFR034C ECM16Q04217 1267 aaKnown RBP15.71■□□□□ 0.11
PHO4YFR034C BOI2P39969 1040 aa15.7■□□□□ 0.1
PHO4YFR034C CST6P40535 587 aa15.7■□□□□ 0.1
PHO4YFR034C NUP133P36161 1157 aa15.69■□□□□ 0.1
PHO4YFR034C SWI1P09547 1314 aa15.68■□□□□ 0.1
PHO4YFR034C NMD2P38798 1089 aaKnown RBP15.68■□□□□ 0.1
PHO4YFR034C YIL055CP40523 627 aaKnown RBP15.68■□□□□ 0.1
PHO4YFR034C NOP53Q12080 455 aaKnown RBP15.68■□□□□ 0.1
PHO4YFR034C SWC3P31376 625 aa15.67■□□□□ 0.1
PHO4YFR034C YKR075CP36155 307 aa15.67■□□□□ 0.1
PHO4YFR034C GCD7P32502 381 aaPredicted RBP15.66■□□□□ 0.1
PHO4YFR034C SSP2Q08646 371 aa15.66■□□□□ 0.1
PHO4YFR034C GRX1P25373 110 aaKnown RBP15.65■□□□□ 0.1
PHO4YFR034C VPS64Q03944 604 aa15.65■□□□□ 0.1
PHO4YFR034C YIR014WP40570 242 aa15.64■□□□□ 0.09
PHO4YFR034C YJR008WP47085 338 aa15.64■□□□□ 0.09
PHO4YFR034C HGH1P48362 394 aaKnown RBP15.64■□□□□ 0.09
PHO4YFR034C TUM1Q08686 304 aaKnown RBP15.64■□□□□ 0.09
PHO4YFR034C UTP10P42945 1769 aaKnown RBP15.64■□□□□ 0.09
PHO4YFR034C NKP2Q06162 153 aa15.62■□□□□ 0.09
PHO4YFR034C LAM6Q08001 693 aa15.62■□□□□ 0.09
PHO4YFR034C MDG1P53885 366 aa15.6■□□□□ 0.09
PHO4YFR034C RAD50P12753 1312 aa15.6■□□□□ 0.09
PHO4YFR034C APL2P36000 726 aaPredicted RBP15.59■□□□□ 0.09
PHO4YFR034C RFC1P38630 861 aaKnown RBP15.59■□□□□ 0.09
PHO4YFR034C OPY1P38271 328 aa15.58■□□□□ 0.08
PHO4YFR034C YPR204WQ08995 1032 aa15.58■□□□□ 0.08
PHO4YFR034C PHM7Q12252 991 aa15.58■□□□□ 0.08
PHO4YFR034C PRP40P33203 583 aaKnown RBP15.57■□□□□ 0.08
PHO4YFR034C LPD1P09624 499 aaKnown RBP15.56■□□□□ 0.08
PHO4YFR034C UBP12P39538 1254 aa15.56■□□□□ 0.08
PHO4YFR034C YLR271WQ06152 274 aa15.56■□□□□ 0.08
PHO4YFR034C ARG8P18544 423 aa15.55■□□□□ 0.08
PHO4YFR034C SET1P38827 1080 aaKnown RBP15.55■□□□□ 0.08
PHO4YFR034C RPN11P43588 306 aaKnown RBP15.55■□□□□ 0.08
PHO4YFR034C CDC16P09798 840 aa15.54■□□□□ 0.08
PHO4YFR034C BDP1P46678 594 aa15.53■□□□□ 0.08
PHO4YFR034C YJL181WP46987 611 aa15.52■□□□□ 0.08
PHO4YFR034C TEA1P47988 759 aa15.52■□□□□ 0.08
PHO4YFR034C PKH1Q03407 766 aa15.52■□□□□ 0.08
PHO4YFR034C MSB4Q12317 492 aa15.51■□□□□ 0.07
PHO4YFR034C IME2P32581 645 aa15.5■□□□□ 0.07
PHO4YFR034C SSF1P38789 453 aaPredicted RBP15.5■□□□□ 0.07
PHO4YFR034C NCB2Q92317 146 aa15.5■□□□□ 0.07
PHO4YFR034C DCD1P06773 312 aa15.49■□□□□ 0.07
PHO4YFR034C YGL082WP53155 381 aa15.48■□□□□ 0.07
PHO4YFR034C YMR074CQ04773 145 aa15.48■□□□□ 0.07
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms