RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C PBS2P08018 668 aa6.28□□□□□ -1.4
SPG3YDR504C ALR1Q08269 859 aa6.27□□□□□ -1.41
SPG3YDR504C AI1P03875 834 aa6.25□□□□□ -1.41
SPG3YDR504C RPA14P50106 137 aa6.24□□□□□ -1.41
SPG3YDR504C YPR097WQ06839 1073 aa6.24□□□□□ -1.41
SPG3YDR504C NIS1P53939 407 aa6.23□□□□□ -1.41
SPG3YDR504C SLY41P22215 453 aa6.21□□□□□ -1.42
SPG3YDR504C YBL086CP38177 466 aa6.21□□□□□ -1.42
SPG3YDR504C YDL206WQ12424 762 aa6.21□□□□□ -1.42
SPG3YDR504C TEA1P47988 759 aa6.2□□□□□ -1.42
SPG3YDR504C YPR053CQ6Q5F3 151 aa6.2□□□□□ -1.42
SPG3YDR504C MAM3Q12296 706 aa6.19□□□□□ -1.42
SPG3YDR504C NAM8Q00539 523 aaKnown RBP6.18□□□□□ -1.42
SPG3YDR504C IES2P40154 320 aa6.17□□□□□ -1.42
SPG3YDR504C CKB1P43639 278 aa6.17□□□□□ -1.42
SPG3YDR504C PUS6P53294 404 aa6.17□□□□□ -1.42
SPG3YDR504C TBF1Q02457 562 aa6.16□□□□□ -1.42
SPG3YDR504C SKN7P38889 622 aa6.15□□□□□ -1.42
SPG3YDR504C FPK1P53739 893 aa6.14□□□□□ -1.43
SPG3YDR504C GLT1Q12680 2145 aaKnown RBP6.13□□□□□ -1.43
SPG3YDR504C APP1P53933 587 aa6.12□□□□□ -1.43
SPG3YDR504C NUP42P49686 430 aaKnown RBP6.11□□□□□ -1.43
SPG3YDR504C CDC19P00549 500 aaKnown RBP6.1□□□□□ -1.43
SPG3YDR504C YMR187CQ03236 431 aa6.1□□□□□ -1.43
SPG3YDR504C YMR196WQ04336 1088 aa6.1□□□□□ -1.43
SPG3YDR504C DSF2P38213 736 aa6.09□□□□□ -1.43
SPG3YDR504C ITT1Q04638 464 aa6.09□□□□□ -1.43
SPG3YDR504C TRM1P15565 570 aaKnown RBP6.08□□□□□ -1.44
SPG3YDR504C SCJ1P25303 377 aa6.08□□□□□ -1.44
SPG3YDR504C VAC17P25591 423 aa6.08□□□□□ -1.44
SPG3YDR504C CUZ1P53899 274 aa6.08□□□□□ -1.44
SPG3YDR504C TDA6Q06466 467 aa6.08□□□□□ -1.44
SPG3YDR504C SBE2P42223 864 aaKnown RBP6.07□□□□□ -1.44
SPG3YDR504C CEM1P39525 442 aa6.06□□□□□ -1.44
SPG3YDR504C DIT2P21595 489 aa6.05□□□□□ -1.44
SPG3YDR504C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
SPG3YDR504C EMW1P42842 904 aaKnown RBP6.04□□□□□ -1.44
SPG3YDR504C ADE12P80210 433 aaKnown RBP6.02□□□□□ -1.45
SPG3YDR504C HST2P53686 357 aa6□□□□□ -1.45
SPG3YDR504C DFG5Q05031 458 aa6□□□□□ -1.45
SPG3YDR504C MMP1Q12372 583 aa5.97□□□□□ -1.45
SPG3YDR504C YCK2P23292 546 aaKnown RBP5.96□□□□□ -1.46
SPG3YDR504C MKS1P34072 584 aa5.96□□□□□ -1.46
SPG3YDR504C SYT1Q06836 1226 aa5.96□□□□□ -1.46
SPG3YDR504C ESS1P22696 170 aa5.95□□□□□ -1.46
SPG3YDR504C AMN1P38285 549 aaPredicted RBP5.94□□□□□ -1.46
SPG3YDR504C MCX1P38323 520 aaPredicted RBP5.94□□□□□ -1.46
SPG3YDR504C VTC4P47075 721 aa5.94□□□□□ -1.46
SPG3YDR504C YNR014WP53719 212 aa5.94□□□□□ -1.46
SPG3YDR504C BDS1Q08347 646 aa5.94□□□□□ -1.46
SPG3YDR504C MAC1P35192 417 aa5.93□□□□□ -1.46
SPG3YDR504C YMR265CQ03508 461 aaKnown RBP5.93□□□□□ -1.46
SPG3YDR504C YJU3P28321 313 aa5.92□□□□□ -1.46
SPG3YDR504C GLN1P32288 370 aaKnown RBP5.91□□□□□ -1.46
SPG3YDR504C SPB4P25808 606 aaPredicted RBP5.9□□□□□ -1.46
SPG3YDR504C DAL1P32375 460 aa5.9□□□□□ -1.46
SPG3YDR504C DIT1P21623 536 aa5.89□□□□□ -1.47
SPG3YDR504C SLN1P39928 1220 aaPredicted RBP5.89□□□□□ -1.47
SPG3YDR504C IRC24P40580 263 aa5.89□□□□□ -1.47
SPG3YDR504C LSB6P42951 607 aa5.89□□□□□ -1.47
SPG3YDR504C RSC30P38781 883 aa5.88□□□□□ -1.47
SPG3YDR504C KRE33P53914 1056 aaKnown RBP5.88□□□□□ -1.47
SPG3YDR504C MCA1Q08601 432 aa5.88□□□□□ -1.47
SPG3YDR504C SAS10Q12136 610 aaPredicted RBP5.87□□□□□ -1.47
SPG3YDR504C YDR215CQ12240 137 aa5.87□□□□□ -1.47
SPG3YDR504C YDR461C-AQ2V2P7 80 aa5.85□□□□□ -1.47
SPG3YDR504C STE6P12866 1290 aa5.84□□□□□ -1.47
SPG3YDR504C BOI2P39969 1040 aa5.84□□□□□ -1.47
SPG3YDR504C FBP26P32604 452 aa5.83□□□□□ -1.48
SPG3YDR504C FIG4P42837 879 aa5.83□□□□□ -1.48
SPG3YDR504C UBP15P50101 1230 aa5.81□□□□□ -1.48
SPG3YDR504C ATF2P53296 535 aa5.81□□□□□ -1.48
SPG3YDR504C YPL034WQ03083 165 aa5.81□□□□□ -1.48
SPG3YDR504C PKH3Q03306 898 aaPredicted RBP5.8□□□□□ -1.48
SPG3YDR504C KTR1P27810 393 aaKnown RBP5.79□□□□□ -1.48
SPG3YDR504C TAT1P38085 619 aa5.79□□□□□ -1.48
SPG3YDR504C ALO1P54783 526 aaKnown RBP5.79□□□□□ -1.48
SPG3YDR504C GPM1P00950 247 aaKnown RBP5.77□□□□□ -1.49
SPG3YDR504C ARG8P18544 423 aa5.77□□□□□ -1.49
SPG3YDR504C YPR084WQ06821 456 aa5.74□□□□□ -1.49
SPG3YDR504C TEC1P18412 486 aa5.73□□□□□ -1.49
SPG3YDR504C OMA1P36163 345 aa5.73□□□□□ -1.49
SPG3YDR504C GLC3P32775 704 aa5.72□□□□□ -1.49
SPG3YDR504C SLA1P32790 1244 aa5.72□□□□□ -1.49
SPG3YDR504C DLD3P39976 496 aaKnown RBP5.72□□□□□ -1.49
SPG3YDR504C MET1P36150 593 aa5.71□□□□□ -1.5
SPG3YDR504C PRY1P47032 299 aa5.71□□□□□ -1.5
SPG3YDR504C INP52P50942 1183 aa5.71□□□□□ -1.5
SPG3YDR504C ISU1Q03020 165 aa5.71□□□□□ -1.5
SPG3YDR504C TY1A-DR3Q12441 440 aa5.69□□□□□ -1.5
SPG3YDR504C SSN3P39073 555 aa5.68□□□□□ -1.5
SPG3YDR504C MSN5P52918 1224 aa5.68□□□□□ -1.5
SPG3YDR504C FPS1P23900 669 aa5.67□□□□□ -1.5
SPG3YDR504C NAF1P53919 492 aaKnown RBP5.67□□□□□ -1.5
SPG3YDR504C AVT1P47082 602 aa5.66□□□□□ -1.5
SPG3YDR504C RAD59Q12223 238 aa5.66□□□□□ -1.5
SPG3YDR504C YNR021WP53723 404 aaKnown RBP5.65□□□□□ -1.5
SPG3YDR504C ATG20Q07528 640 aa5.65□□□□□ -1.5
SPG3YDR504C DMA1P38823 416 aa5.64□□□□□ -1.51
SPG3YDR504C CSN12P47130 423 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms