RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W FUN12P39730 1002 aaKnown RBP11.93□□□□□ -0.5
SED1YDR077W IES2P40154 320 aa11.93□□□□□ -0.5
SED1YDR077W IMH1Q06704 911 aaKnown RBP11.92□□□□□ -0.5
SED1YDR077W MAM1P40065 302 aa11.91□□□□□ -0.5
SED1YDR077W MEC3Q02574 474 aa11.91□□□□□ -0.5
SED1YDR077W MAK21Q12176 1025 aaKnown RBP11.91□□□□□ -0.5
SED1YDR077W YRF1-3P0CX14 1859 aa11.91□□□□□ -0.5
SED1YDR077W YRF1-7P0CX15 1859 aa11.91□□□□□ -0.5
SED1YDR077W YRF1-6P53819 1859 aa11.91□□□□□ -0.5
SED1YDR077W ZDS1P50111 915 aaKnown RBP11.9□□□□□ -0.5
SED1YDR077W ROM2P51862 1356 aaKnown RBP11.9□□□□□ -0.5
SED1YDR077W RAD2P07276 1031 aa11.89□□□□□ -0.51
SED1YDR077W GYP7P48365 746 aa11.89□□□□□ -0.51
SED1YDR077W EDE1P34216 1381 aa11.89□□□□□ -0.51
SED1YDR077W BUD27P43573 796 aaKnown RBP RIP-Chip data11.88□□□□□ -0.51not detected
SED1YDR077W KCC4P25389 1037 aa11.87□□□□□ -0.51
SED1YDR077W UGA3P26370 528 aa11.87□□□□□ -0.51
SED1YDR077W FPR3P38911 411 aaKnown RBP11.87□□□□□ -0.51
SED1YDR077W RRT14P40470 206 aa11.87□□□□□ -0.51
SED1YDR077W INP54Q08227 384 aaKnown RBP11.87□□□□□ -0.51
SED1YDR077W NUP145P49687 1317 aa11.86□□□□□ -0.51
SED1YDR077W YKL133CP36066 463 aa11.86□□□□□ -0.51
SED1YDR077W YFR016CP43597 1233 aaKnown RBP11.86□□□□□ -0.51
SED1YDR077W LYS2P07702 1392 aa11.85□□□□□ -0.51
SED1YDR077W NSE3Q05541 303 aa11.85□□□□□ -0.51
SED1YDR077W DAL5P15365 543 aa11.84□□□□□ -0.51
SED1YDR077W YIL092WP40497 633 aa11.84□□□□□ -0.51
SED1YDR077W ADE16P54113 591 aaKnown RBP11.84□□□□□ -0.51
SED1YDR077W FRK1Q03002 865 aaPredicted RBP11.82□□□□□ -0.52
SED1YDR077W BMS1Q08965 1183 aaKnown RBP11.82□□□□□ -0.52
SED1YDR077W SRT1Q03175 343 aa11.81□□□□□ -0.52
SED1YDR077W ATG13Q06628 738 aa11.81□□□□□ -0.52
SED1YDR077W YBR287WP38355 427 aa11.8□□□□□ -0.52
SED1YDR077W COQ4O13525 335 aa11.79□□□□□ -0.52
SED1YDR077W TFA1P36100 482 aa11.79□□□□□ -0.52
SED1YDR077W YIL055CP40523 627 aaKnown RBP11.79□□□□□ -0.52
SED1YDR077W OSM1P21375 501 aaKnown RBP11.78□□□□□ -0.52
SED1YDR077W RIM15P43565 1770 aa11.77□□□□□ -0.53
SED1YDR077W ALE1Q08548 619 aa11.76□□□□□ -0.53
SED1YDR077W DOT5P40553 215 aa11.75□□□□□ -0.53
SED1YDR077W YBP2P53169 641 aa11.75□□□□□ -0.53
SED1YDR077W FOX2Q02207 900 aaKnown RBP11.75□□□□□ -0.53
SED1YDR077W COBP00163 385 aa11.73□□□□□ -0.53
SED1YDR077W YPP1P46951 817 aa11.73□□□□□ -0.53
SED1YDR077W POL32P47110 350 aa11.73□□□□□ -0.53
SED1YDR077W RMT2Q03305 412 aa11.73□□□□□ -0.53
SED1YDR077W YOL057WQ08225 711 aa11.73□□□□□ -0.53
SED1YDR077W RAD4P14736 754 aa11.72□□□□□ -0.53
SED1YDR077W TRP5P00931 707 aaKnown RBP11.71□□□□□ -0.53
SED1YDR077W LAM6Q08001 693 aa11.71□□□□□ -0.53
SED1YDR077W PUF6Q04373 656 aaKnown RBP11.7□□□□□ -0.54
SED1YDR077W MRPL32P25348 183 aa11.69□□□□□ -0.54
SED1YDR077W PRP40P33203 583 aaKnown RBP11.69□□□□□ -0.54
SED1YDR077W NOP8Q08287 484 aaPredicted RBP11.69□□□□□ -0.54
SED1YDR077W MRP7P12687 371 aa11.68□□□□□ -0.54
SED1YDR077W GRX1P25373 110 aaKnown RBP11.68□□□□□ -0.54
SED1YDR077W YKR075CP36155 307 aa11.68□□□□□ -0.54
SED1YDR077W CSI1Q04368 295 aa11.68□□□□□ -0.54
SED1YDR077W YJL181WP46987 611 aa11.67□□□□□ -0.54
SED1YDR077W RPS19AP07280 144 aaKnown RBP11.66□□□□□ -0.54
SED1YDR077W RPS19BP07281 144 aaPredicted RBP11.66□□□□□ -0.54
SED1YDR077W DNM1P54861 757 aa11.66□□□□□ -0.54
SED1YDR077W SSP2Q08646 371 aa11.66□□□□□ -0.54
SED1YDR077W NOP53Q12080 455 aaKnown RBP11.66□□□□□ -0.54
SED1YDR077W MDG1P53885 366 aa11.65□□□□□ -0.54
SED1YDR077W YDR306CQ06640 478 aa11.65□□□□□ -0.54
SED1YDR077W RAD24P32641 659 aa11.64□□□□□ -0.55
SED1YDR077W YNG2P38806 282 aaKnown RBP11.64□□□□□ -0.55
SED1YDR077W ZDS2P54786 942 aa11.64□□□□□ -0.55
SED1YDR077W YMR074CQ04773 145 aa11.64□□□□□ -0.55
SED1YDR077W NUP133P36161 1157 aa11.63□□□□□ -0.55
SED1YDR077W CST6P40535 587 aa11.63□□□□□ -0.55
SED1YDR077W RPN11P43588 306 aaKnown RBP11.63□□□□□ -0.55
SED1YDR077W SPO1P53541 631 aa11.63□□□□□ -0.55
SED1YDR077W RPC31P17890 251 aa11.61□□□□□ -0.55
SED1YDR077W YGR122WP53272 402 aa11.61□□□□□ -0.55
SED1YDR077W VPS64Q03944 604 aa11.61□□□□□ -0.55
SED1YDR077W SWI1P09547 1314 aa11.6□□□□□ -0.55
SED1YDR077W UBP1P25037 809 aa11.6□□□□□ -0.55
SED1YDR077W BOI2P39969 1040 aa11.6□□□□□ -0.55
SED1YDR077W TUM1Q08686 304 aaKnown RBP11.6□□□□□ -0.55
SED1YDR077W UTP10P42945 1769 aaKnown RBP11.59□□□□□ -0.55
SED1YDR077W AVT3P36062 692 aa11.59□□□□□ -0.55
SED1YDR077W ILV3P39522 585 aaKnown RBP11.59□□□□□ -0.55
SED1YDR077W MSB4Q12317 492 aa11.59□□□□□ -0.55
SED1YDR077W ECM16Q04217 1267 aaKnown RBP11.58□□□□□ -0.56
SED1YDR077W PHM7Q12252 991 aa11.58□□□□□ -0.56
SED1YDR077W GLN1P32288 370 aaKnown RBP11.57□□□□□ -0.56
SED1YDR077W NMD2P38798 1089 aaKnown RBP11.57□□□□□ -0.56
SED1YDR077W YJR008WP47085 338 aa11.57□□□□□ -0.56
SED1YDR077W HGH1P48362 394 aaKnown RBP11.57□□□□□ -0.56
SED1YDR077W SWC3P31376 625 aa11.56□□□□□ -0.56
SED1YDR077W TEA1P47988 759 aa11.56□□□□□ -0.56
SED1YDR077W BUD31P25337 157 aaPredicted RBP11.55□□□□□ -0.56
SED1YDR077W GCD7P32502 381 aaPredicted RBP11.55□□□□□ -0.56
SED1YDR077W NPR2P39923 615 aa11.55□□□□□ -0.56
SED1YDR077W PKH1Q03407 766 aa11.55□□□□□ -0.56
SED1YDR077W YLR271WQ06152 274 aa11.55□□□□□ -0.56
SED1YDR077W APL2P36000 726 aaPredicted RBP11.54□□□□□ -0.56
SED1YDR077W YPR204WQ08995 1032 aa11.54□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms