RNA–Protein interactions for RNA: YCR106W

RDS1, Transcript of Putative zinc cluster transcription factor, yeast

Gene RDS1, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDS1	YCR106W	RVB2	Q12464	471 aa	Known RBP	4.62	□□□□□ -1.67
RDS1	YCR106W	LYS2	P07702	1392 aa		4.61	□□□□□ -1.67
RDS1	YCR106W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
RDS1	YCR106W	NUP145	P49687	1317 aa		4.6	□□□□□ -1.67
RDS1	YCR106W	UGA3	P26370	528 aa		4.6	□□□□□ -1.67
RDS1	YCR106W	TPD3	P31383	635 aa		4.6	□□□□□ -1.67
RDS1	YCR106W	HSP104	P31539	908 aa	Known RBP	4.6	□□□□□ -1.67
RDS1	YCR106W	YIL055C	P40523	627 aa	Known RBP	4.6	□□□□□ -1.67
RDS1	YCR106W	INP54	Q08227	384 aa	Known RBP	4.6	□□□□□ -1.67
RDS1	YCR106W	RTT109	Q07794	436 aa		4.59	□□□□□ -1.67
RDS1	YCR106W	KCC4	P25389	1037 aa		4.58	□□□□□ -1.68
RDS1	YCR106W	YKL133C	P36066	463 aa		4.58	□□□□□ -1.68
RDS1	YCR106W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
RDS1	YCR106W	GYP7	P48365	746 aa		4.58	□□□□□ -1.68
RDS1	YCR106W	ZDS1	P50111	915 aa	Known RBP	4.58	□□□□□ -1.68
RDS1	YCR106W	RIM15	P43565	1770 aa		4.58	□□□□□ -1.68
RDS1	YCR106W	NOP2	P40991	618 aa	Known RBP	4.58	□□□□□ -1.68
RDS1	YCR106W	NSE3	Q05541	303 aa		4.58	□□□□□ -1.68
RDS1	YCR106W	MAK21	Q12176	1025 aa	Known RBP	4.57	□□□□□ -1.68
RDS1	YCR106W	OSM1	P21375	501 aa	Known RBP	4.56	□□□□□ -1.68
RDS1	YCR106W	ADE16	P54113	591 aa	Known RBP	4.56	□□□□□ -1.68
RDS1	YCR106W	TFA1	P36100	482 aa		4.56	□□□□□ -1.68
RDS1	YCR106W	DOT5	P40553	215 aa		4.56	□□□□□ -1.68
RDS1	YCR106W	YMR074C	Q04773	145 aa		4.56	□□□□□ -1.68
RDS1	YCR106W	ATG13	Q06628	738 aa		4.56	□□□□□ -1.68
RDS1	YCR106W	RAD2	P07276	1031 aa		4.55	□□□□□ -1.68
RDS1	YCR106W	RRT14	P40470	206 aa		4.55	□□□□□ -1.68
RDS1	YCR106W	FOX2	Q02207	900 aa	Known RBP	4.55	□□□□□ -1.68
RDS1	YCR106W	YIL092W	P40497	633 aa		4.55	□□□□□ -1.68
RDS1	YCR106W	GRX1	P25373	110 aa	Known RBP	4.54	□□□□□ -1.68
RDS1	YCR106W	BMS1	Q08965	1183 aa	Known RBP	4.54	□□□□□ -1.68
RDS1	YCR106W	COQ4	O13525	335 aa		4.54	□□□□□ -1.68
RDS1	YCR106W	YKR075C	P36155	307 aa		4.54	□□□□□ -1.68
RDS1	YCR106W	YPP1	P46951	817 aa		4.54	□□□□□ -1.68
RDS1	YCR106W	MDG1	P53885	366 aa		4.54	□□□□□ -1.68
RDS1	YCR106W	FRK1	Q03002	865 aa	Predicted RBP	4.54	□□□□□ -1.68
RDS1	YCR106W	SRT1	Q03175	343 aa		4.54	□□□□□ -1.68
RDS1	YCR106W	LAM6	Q08001	693 aa		4.54	□□□□□ -1.68
RDS1	YCR106W	YOL057W	Q08225	711 aa		4.54	□□□□□ -1.68
RDS1	YCR106W	COB	P00163	385 aa		4.53	□□□□□ -1.68
RDS1	YCR106W	YBP2	P53169	641 aa		4.53	□□□□□ -1.68
RDS1	YCR106W	RMT2	Q03305	412 aa		4.53	□□□□□ -1.68
RDS1	YCR106W	TSR3	Q12094	313 aa	Known RBP	4.53	□□□□□ -1.68
RDS1	YCR106W	GLN1	P32288	370 aa	Known RBP	4.53	□□□□□ -1.68
RDS1	YCR106W	PRP40	P33203	583 aa	Known RBP	4.53	□□□□□ -1.68
RDS1	YCR106W	FPR3	P38911	411 aa	Known RBP	4.53	□□□□□ -1.68
RDS1	YCR106W	UBP1	P25037	809 aa		4.52	□□□□□ -1.69
RDS1	YCR106W	RPG1	P38249	964 aa	Known RBP	4.52	□□□□□ -1.69
RDS1	YCR106W	YJR008W	P47085	338 aa		4.52	□□□□□ -1.69
RDS1	YCR106W	YDR306C	Q06640	478 aa		4.51	□□□□□ -1.69
RDS1	YCR106W	ALE1	Q08548	619 aa		4.51	□□□□□ -1.69
RDS1	YCR106W	SSP2	Q08646	371 aa		4.51	□□□□□ -1.69
RDS1	YCR106W	ISW2	Q08773	1120 aa		4.51	□□□□□ -1.69
RDS1	YCR106W	NOP53	Q12080	455 aa	Known RBP	4.51	□□□□□ -1.69
RDS1	YCR106W	PHM7	Q12252	991 aa		4.51	□□□□□ -1.69
RDS1	YCR106W	UTP10	P42945	1769 aa	Known RBP	4.51	□□□□□ -1.69
RDS1	YCR106W	DAL5	P15365	543 aa		4.51	□□□□□ -1.69
RDS1	YCR106W	YJL181W	P46987	611 aa		4.51	□□□□□ -1.69
RDS1	YCR106W	HGH1	P48362	394 aa	Known RBP	4.51	□□□□□ -1.69
RDS1	YCR106W	RAD4	P14736	754 aa		4.5	□□□□□ -1.69
RDS1	YCR106W	DNM1	P54861	757 aa		4.5	□□□□□ -1.69
RDS1	YCR106W	RPS19A	P07280	144 aa	Known RBP	4.5	□□□□□ -1.69
RDS1	YCR106W	RPS19B	P07281	144 aa	Predicted RBP	4.5	□□□□□ -1.69
RDS1	YCR106W	FUN12	P39730	1002 aa	Known RBP	4.5	□□□□□ -1.69
RDS1	YCR106W	CST6	P40535	587 aa		4.5	□□□□□ -1.69
RDS1	YCR106W	RPN11	P43588	306 aa	Known RBP	4.5	□□□□□ -1.69
RDS1	YCR106W	MSB4	Q12317	492 aa		4.5	□□□□□ -1.69
RDS1	YCR106W	MRP7	P12687	371 aa		4.49	□□□□□ -1.69
RDS1	YCR106W	YBR287W	P38355	427 aa		4.49	□□□□□ -1.69
RDS1	YCR106W	NPR2	P39923	615 aa		4.49	□□□□□ -1.69
RDS1	YCR106W	POL32	P47110	350 aa		4.49	□□□□□ -1.69
RDS1	YCR106W	GTT3	P39996	337 aa		4.49	□□□□□ -1.69
RDS1	YCR106W	NOP8	Q08287	484 aa	Predicted RBP	4.49	□□□□□ -1.69
RDS1	YCR106W	BUD31	P25337	157 aa	Predicted RBP	4.48	□□□□□ -1.69
RDS1	YCR106W	CSI1	Q04368	295 aa		4.48	□□□□□ -1.69
RDS1	YCR106W	TRP5	P00931	707 aa	Known RBP	4.48	□□□□□ -1.69
RDS1	YCR106W	YLR271W	Q06152	274 aa		4.48	□□□□□ -1.69
RDS1	YCR106W	TUM1	Q08686	304 aa	Known RBP	4.48	□□□□□ -1.69
RDS1	YCR106W	GRE2	Q12068	342 aa	Known RBP	4.48	□□□□□ -1.69
RDS1	YCR106W	SWI1	P09547	1314 aa		4.48	□□□□□ -1.69
RDS1	YCR106W	SET1	P38827	1080 aa	Known RBP	4.47	□□□□□ -1.69
RDS1	YCR106W	ECM16	Q04217	1267 aa	Known RBP	4.47	□□□□□ -1.69
RDS1	YCR106W	SSK22	P25390	1331 aa	Predicted RBP	4.47	□□□□□ -1.69
RDS1	YCR106W	GCD7	P32502	381 aa	Predicted RBP	4.47	□□□□□ -1.69
RDS1	YCR106W	BDF1	P35817	686 aa		4.47	□□□□□ -1.69
RDS1	YCR106W	BUG1	Q12191	341 aa		4.47	□□□□□ -1.69
RDS1	YCR106W	RAD24	P32641	659 aa		4.46	□□□□□ -1.7
RDS1	YCR106W	YNG2	P38806	282 aa	Known RBP	4.46	□□□□□ -1.7
RDS1	YCR106W	BOI2	P39969	1040 aa		4.46	□□□□□ -1.7
RDS1	YCR106W	UTP22	P53254	1237 aa	Predicted RBP	4.46	□□□□□ -1.7
RDS1	YCR106W	PUF6	Q04373	656 aa	Known RBP	4.46	□□□□□ -1.7
RDS1	YCR106W	NYV1	Q12255	253 aa		4.46	□□□□□ -1.7
RDS1	YCR106W	ARG8	P18544	423 aa		4.46	□□□□□ -1.7
RDS1	YCR106W	YPR204W	Q08995	1032 aa		4.46	□□□□□ -1.7
RDS1	YCR106W	TEA1	P47988	759 aa		4.45	□□□□□ -1.7
RDS1	YCR106W	ZDS2	P54786	942 aa		4.45	□□□□□ -1.7
RDS1	YCR106W	NUP133	P36161	1157 aa		4.45	□□□□□ -1.7
RDS1	YCR106W	ALD2	P47771	506 aa		4.45	□□□□□ -1.7
RDS1	YCR106W	VPS64	Q03944	604 aa		4.45	□□□□□ -1.7
RDS1	YCR106W	UBP12	P39538	1254 aa		4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms