RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C FPK1P53739 893 aa5.75□□□□□ -1.49
SRD1YCR018C ARG82P07250 355 aa5.74□□□□□ -1.49
SRD1YCR018C IES2P40154 320 aa5.74□□□□□ -1.49
SRD1YCR018C AAD14P42884 376 aa5.74□□□□□ -1.49
SRD1YCR018C TBF1Q02457 562 aa5.74□□□□□ -1.49
SRD1YCR018C YNR021WP53723 404 aaKnown RBP5.73□□□□□ -1.49
SRD1YCR018C YMR196WQ04336 1088 aa5.72□□□□□ -1.49
SRD1YCR018C DPH6Q12429 685 aa5.72□□□□□ -1.49
SRD1YCR018C DLD1P32891 587 aa5.71□□□□□ -1.5
SRD1YCR018C ROG3P43602 733 aa5.71□□□□□ -1.5
SRD1YCR018C YJR098CP47139 656 aa5.71□□□□□ -1.5
SRD1YCR018C NUP42P49686 430 aaKnown RBP5.71□□□□□ -1.5
SRD1YCR018C DMA2P53924 522 aa5.7□□□□□ -1.5
SRD1YCR018C TY1A-MR1Q04215 440 aa5.7□□□□□ -1.5
SRD1YCR018C TCB1Q12466 1186 aa5.7□□□□□ -1.5
SRD1YCR018C TRM1P15565 570 aaKnown RBP5.69□□□□□ -1.5
SRD1YCR018C MDJ1P35191 511 aa5.69□□□□□ -1.5
SRD1YCR018C YBL086CP38177 466 aa5.69□□□□□ -1.5
SRD1YCR018C OSH7P38755 437 aa5.69□□□□□ -1.5
SRD1YCR018C PHM7Q12252 991 aa5.69□□□□□ -1.5
SRD1YCR018C CCP1P00431 361 aa5.68□□□□□ -1.5
SRD1YCR018C SCJ1P25303 377 aa5.68□□□□□ -1.5
SRD1YCR018C GLC3P32775 704 aa5.68□□□□□ -1.5
SRD1YCR018C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
SRD1YCR018C KIN1P13185 1064 aa5.67□□□□□ -1.5
SRD1YCR018C DIT2P21595 489 aa5.67□□□□□ -1.5
SRD1YCR018C ATF2P53296 535 aa5.67□□□□□ -1.5
SRD1YCR018C VAC17P25591 423 aa5.65□□□□□ -1.5
SRD1YCR018C LYS5P50113 272 aa5.65□□□□□ -1.5
SRD1YCR018C AIM7Q12156 149 aa5.65□□□□□ -1.5
SRD1YCR018C NRD1P53617 575 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
SRD1YCR018C HGH1P48362 394 aaKnown RBP5.63□□□□□ -1.51
SRD1YCR018C HST2P53686 357 aa5.63□□□□□ -1.51
SRD1YCR018C ITT1Q04638 464 aa5.63□□□□□ -1.51
SRD1YCR018C JJJ3P47138 172 aa5.62□□□□□ -1.51
SRD1YCR018C APP1P53933 587 aa5.62□□□□□ -1.51
SRD1YCR018C NSG2P53898 299 aa5.61□□□□□ -1.51
SRD1YCR018C MMP1Q12372 583 aa5.6□□□□□ -1.51
SRD1YCR018C EMW1P42842 904 aaKnown RBP5.59□□□□□ -1.51
SRD1YCR018C NAM8Q00539 523 aaKnown RBP5.58□□□□□ -1.52
SRD1YCR018C THI72Q08579 599 aa5.58□□□□□ -1.52
SRD1YCR018C YFL066CP43538 392 aa5.56□□□□□ -1.52
SRD1YCR018C CCT8P47079 568 aaKnown RBP5.56□□□□□ -1.52
SRD1YCR018C ESS1P22696 170 aa5.55□□□□□ -1.52
SRD1YCR018C CDC19P00549 500 aaKnown RBP5.54□□□□□ -1.52
SRD1YCR018C GLN1P32288 370 aaKnown RBP5.54□□□□□ -1.52
SRD1YCR018C GUA1P38625 525 aaKnown RBP5.54□□□□□ -1.52
SRD1YCR018C AI1P03875 834 aa5.53□□□□□ -1.52
SRD1YCR018C YJU3P28321 313 aa5.53□□□□□ -1.52
SRD1YCR018C DFG5Q05031 458 aa5.53□□□□□ -1.52
SRD1YCR018C MKS1P34072 584 aa5.52□□□□□ -1.53
SRD1YCR018C RLF2Q12495 606 aa5.52□□□□□ -1.53
SRD1YCR018C RSC30P38781 883 aa5.51□□□□□ -1.53
SRD1YCR018C SSA2P10592 639 aaKnown RBP5.49□□□□□ -1.53
SRD1YCR018C CSN12P47130 423 aa5.49□□□□□ -1.53
SRD1YCR018C CUZ1P53899 274 aa5.49□□□□□ -1.53
SRD1YCR018C HPC2Q01448 625 aa5.49□□□□□ -1.53
SRD1YCR018C BDS1Q08347 646 aa5.49□□□□□ -1.53
SRD1YCR018C BRL1P38770 471 aa5.48□□□□□ -1.53
SRD1YCR018C FIG4P42837 879 aa5.47□□□□□ -1.53
SRD1YCR018C YPR053CQ6Q5F3 151 aa5.47□□□□□ -1.53
SRD1YCR018C SBP1P10080 294 aaKnown RBP5.46□□□□□ -1.54
SRD1YCR018C CEM1P39525 442 aa5.46□□□□□ -1.54
SRD1YCR018C VTC4P47075 721 aa5.46□□□□□ -1.54
SRD1YCR018C TFB3Q03290 321 aa5.46□□□□□ -1.54
SRD1YCR018C STE6P12866 1290 aa5.44□□□□□ -1.54
SRD1YCR018C FBP26P32604 452 aa5.44□□□□□ -1.54
SRD1YCR018C SKN7P38889 622 aa5.42□□□□□ -1.54
SRD1YCR018C DAL1P32375 460 aa5.41□□□□□ -1.54
SRD1YCR018C PKH3Q03306 898 aaPredicted RBP5.41□□□□□ -1.54
SRD1YCR018C ARG8P18544 423 aa5.4□□□□□ -1.54
SRD1YCR018C SBE2P42223 864 aaKnown RBP5.4□□□□□ -1.54
SRD1YCR018C ADE12P80210 433 aaKnown RBP5.4□□□□□ -1.54
SRD1YCR018C TDA6Q06466 467 aa5.4□□□□□ -1.54
SRD1YCR018C YMR187CQ03236 431 aa5.39□□□□□ -1.55
SRD1YCR018C SYT1Q06836 1226 aa5.39□□□□□ -1.55
SRD1YCR018C PKC1P24583 1151 aa5.38□□□□□ -1.55
SRD1YCR018C KTR1P27810 393 aaKnown RBP5.38□□□□□ -1.55
SRD1YCR018C YMR265CQ03508 461 aaKnown RBP5.38□□□□□ -1.55
SRD1YCR018C TEC1P18412 486 aa5.37□□□□□ -1.55
SRD1YCR018C DIT1P21623 536 aa5.37□□□□□ -1.55
SRD1YCR018C YJL007CP47080 104 aa5.37□□□□□ -1.55
SRD1YCR018C YPR084WQ06821 456 aa5.37□□□□□ -1.55
SRD1YCR018C YBL036CP38197 257 aa5.36□□□□□ -1.55
SRD1YCR018C ISU1Q03020 165 aa5.35□□□□□ -1.55
SRD1YCR018C RPL34BP40525 121 aaKnown RBP5.34□□□□□ -1.55
SRD1YCR018C UBP15P50101 1230 aa5.34□□□□□ -1.55
SRD1YCR018C KRE33P53914 1056 aaKnown RBP5.34□□□□□ -1.55
SRD1YCR018C BIM1P40013 344 aa5.33□□□□□ -1.56
SRD1YCR018C YDR461C-AQ2V2P7 80 aa5.33□□□□□ -1.56
SRD1YCR018C DLD3P39976 496 aaKnown RBP5.32□□□□□ -1.56
SRD1YCR018C ATG20Q07528 640 aa5.32□□□□□ -1.56
SRD1YCR018C RAD59Q12223 238 aa5.32□□□□□ -1.56
SRD1YCR018C MCX1P38323 520 aaPredicted RBP5.31□□□□□ -1.56
SRD1YCR018C YNR014WP53719 212 aa5.31□□□□□ -1.56
SRD1YCR018C YCK2P23292 546 aaKnown RBP5.3□□□□□ -1.56
SRD1YCR018C SLA1P32790 1244 aa5.3□□□□□ -1.56
SRD1YCR018C ATG32P40458 529 aa5.3□□□□□ -1.56
SRD1YCR018C CSE4P36012 229 aa5.29□□□□□ -1.56
SRD1YCR018C RPP2BP02400 110 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms