RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 FBXO41Q8TF61 875 aa8.67□□□□□ -1.02
CASC19-260ENST00000641828 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
CASC19-260ENST00000641828 RSPH6AQ9H0K4 717 aa8.67□□□□□ -1.02
CASC19-260ENST00000641828 LMTK3Q96Q04 1460 aa8.66□□□□□ -1.02
CASC19-260ENST00000641828 NUTM2FA1L443 756 aa8.66□□□□□ -1.02
CASC19-260ENST00000641828 ZNF316A6NFI3 1004 aaPredicted RBP8.66□□□□□ -1.02
CASC19-260ENST00000641828 PDCD7Q8N8D1 485 aaKnown RBP8.66□□□□□ -1.02
CASC19-260ENST00000641828 C2orf72A6NCS6 295 aa8.65□□□□□ -1.02
CASC19-260ENST00000641828 MAP3K9P80192 1104 aa8.65□□□□□ -1.02
CASC19-260ENST00000641828 MROH2BQ7Z745 1585 aa8.65□□□□□ -1.02
CASC19-260ENST00000641828 IRF6O14896 467 aa8.64□□□□□ -1.03
CASC19-260ENST00000641828 DDRGK1Q96HY6 314 aa8.64□□□□□ -1.03
CASC19-260ENST00000641828 KIF3CO14782 793 aa8.64□□□□□ -1.03
CASC19-260ENST00000641828 AMHR2Q16671 573 aa8.64□□□□□ -1.03
CASC19-260ENST00000641828 PLEKHG3A1L390 1219 aa8.63□□□□□ -1.03
CASC19-260ENST00000641828 TMEM121BQ9BXQ6 578 aaPredicted RBP8.63□□□□□ -1.03
CASC19-260ENST00000641828 CFTRP13569 1480 aa8.63□□□□□ -1.03
CASC19-260ENST00000641828 GNPATO15228 680 aa8.63□□□□□ -1.03
CASC19-260ENST00000641828 OSBPP22059 807 aa8.63□□□□□ -1.03
CASC19-260ENST00000641828 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
CASC19-260ENST00000641828 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
CASC19-260ENST00000641828 CLASP1Q7Z460 1538 aa8.62□□□□□ -1.03
CASC19-260ENST00000641828 KIF13AQ9H1H9 1805 aa8.62□□□□□ -1.03
CASC19-260ENST00000641828 AQRO60306 1485 aaKnown RBP eCLIP8.62□□□□□ -1.033e-6■■■■□ 24.7
CASC19-260ENST00000641828 GALR2O43603 387 aaPredicted RBP8.61□□□□□ -1.03
CASC19-260ENST00000641828 UBTFP17480 764 aaKnown RBP8.61□□□□□ -1.03
CASC19-260ENST00000641828 GAPVD1Q14C86 1478 aa8.61□□□□□ -1.03
CASC19-260ENST00000641828 HECW2Q9P2P5 1572 aa8.61□□□□□ -1.03
CASC19-260ENST00000641828 SOCS7O14512 581 aa8.61□□□□□ -1.03
CASC19-260ENST00000641828 HIC1Q14526 733 aa8.61□□□□□ -1.03
CASC19-260ENST00000641828 YTHDC1Q96MU7 727 aaKnown RBP8.61□□□□□ -1.03
CASC19-260ENST00000641828 SYNJ1O43426 1573 aa8.6□□□□□ -1.03
CASC19-260ENST00000641828 FCHSD2O94868 740 aa8.6□□□□□ -1.03
CASC19-260ENST00000641828 UPF1Q92900 1129 aaKnown RBP eCLIP8.6□□□□□ -1.03
CASC19-260ENST00000641828 G3V3G9 751 aa8.59□□□□□ -1.03
CASC19-260ENST00000641828 IRX5P78411 483 aaPredicted RBP8.59□□□□□ -1.03
CASC19-260ENST00000641828 FECHP22830 423 aa8.59□□□□□ -1.03
CASC19-260ENST00000641828 PTGER2P43116 358 aa8.59□□□□□ -1.03
CASC19-260ENST00000641828 DDX12PQ92771 950 aa8.58□□□□□ -1.04
CASC19-260ENST00000641828 OCEL1Q9H607 264 aa8.58□□□□□ -1.04
CASC19-260ENST00000641828 PRDM2Q13029 1718 aa8.58□□□□□ -1.04
CASC19-260ENST00000641828 ATN1P54259 1190 aaPredicted RBP8.58□□□□□ -1.04
CASC19-260ENST00000641828 OXER1Q8TDS5 423 aa8.57□□□□□ -1.04
CASC19-260ENST00000641828 TTLL12Q14166 644 aaPredicted RBP8.56□□□□□ -1.04
CASC19-260ENST00000641828 TOPBP1Q92547 1522 aa8.56□□□□□ -1.04
CASC19-260ENST00000641828 CHMP7Q8WUX9 453 aaPredicted RBP8.56□□□□□ -1.04
CASC19-260ENST00000641828 KDM6BO15054 1643 aa8.55□□□□□ -1.04
CASC19-260ENST00000641828 FLIIQ13045 1269 aa8.55□□□□□ -1.04
CASC19-260ENST00000641828 IER5LQ5T953 404 aa8.55□□□□□ -1.04
CASC19-260ENST00000641828 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
CASC19-260ENST00000641828 SUPT16HQ9Y5B9 1047 aaKnown RBP8.55□□□□□ -1.04
CASC19-260ENST00000641828 WIZO95785 1651 aa8.55□□□□□ -1.04
CASC19-260ENST00000641828 TBC1D12O60347 775 aa8.54□□□□□ -1.04
CASC19-260ENST00000641828 PTGDRQ13258 359 aa8.54□□□□□ -1.04
CASC19-260ENST00000641828 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
CASC19-260ENST00000641828 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
CASC19-260ENST00000641828 ILDR2Q71H61 639 aa8.53□□□□□ -1.04
CASC19-260ENST00000641828 ARID3AQ99856 593 aa8.53□□□□□ -1.04
CASC19-260ENST00000641828 C1orf115Q9H7X2 142 aa8.53□□□□□ -1.04
CASC19-260ENST00000641828 TARBP1Q13395 1621 aaKnown RBP8.53□□□□□ -1.04
CASC19-260ENST00000641828 ATMINO43313 823 aaPredicted RBP8.53□□□□□ -1.04
CASC19-260ENST00000641828 EVI5O60447 810 aa8.52□□□□□ -1.05
CASC19-260ENST00000641828 CLCN6P51797 869 aa8.52□□□□□ -1.05
CASC19-260ENST00000641828 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.05
CASC19-260ENST00000641828 GIGYF2Q6Y7W6 1299 aaKnown RBP8.52□□□□□ -1.05
CASC19-260ENST00000641828 PLCG2P16885 1265 aa8.51□□□□□ -1.05
CASC19-260ENST00000641828 PODXL2Q9NZ53 605 aa8.51□□□□□ -1.05
CASC19-260ENST00000641828 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
CASC19-260ENST00000641828 ABCC8Q09428 1581 aa8.51□□□□□ -1.05
CASC19-260ENST00000641828 ADGRL1O94910 1474 aa8.51□□□□□ -1.05
CASC19-260ENST00000641828 MS4A1P11836 297 aa8.51□□□□□ -1.05
CASC19-260ENST00000641828 ASTLQ6HA08 431 aaPredicted RBP8.51□□□□□ -1.05
CASC19-260ENST00000641828 L3MBTL3Q96JM7 780 aaPredicted RBP8.51□□□□□ -1.05
CASC19-260ENST00000641828 SYNJ2O15056 1496 aa8.5□□□□□ -1.05
CASC19-260ENST00000641828 DISP3Q9P2K9 1392 aa8.5□□□□□ -1.05
CASC19-260ENST00000641828 ONECUT3O60422 494 aaPredicted RBP8.5□□□□□ -1.05
CASC19-260ENST00000641828 FAM69CQ0P6D2 419 aa8.5□□□□□ -1.05
CASC19-260ENST00000641828 ARID3CA6NKF2 412 aa8.49□□□□□ -1.05
CASC19-260ENST00000641828 DNMBPQ6XZF7 1577 aa8.48□□□□□ -1.05
CASC19-260ENST00000641828 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
CASC19-260ENST00000641828 APBB1O00213 710 aa8.47□□□□□ -1.05
CASC19-260ENST00000641828 REPIN1Q9BWE0 567 aaKnown RBP8.47□□□□□ -1.05
CASC19-260ENST00000641828 TSPOAP1O95153 1857 aa8.47□□□□□ -1.05
CASC19-260ENST00000641828 TDRD9Q8NDG6 1382 aaKnown RBP8.46□□□□□ -1.06
CASC19-260ENST00000641828 MAGI1Q96QZ7 1491 aaPredicted RBP8.45□□□□□ -1.06
CASC19-260ENST00000641828 PTCD2Q8WV60 388 aaKnown RBP8.44□□□□□ -1.06
CASC19-260ENST00000641828 CDHR5Q9HBB8 845 aa8.44□□□□□ -1.06
CASC19-260ENST00000641828 EN1Q05925 392 aaPredicted RBP8.44□□□□□ -1.06
CASC19-260ENST00000641828 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
CASC19-260ENST00000641828 A6NJR5 290 aa8.43□□□□□ -1.06
CASC19-260ENST00000641828 CLCN1P35523 988 aa8.43□□□□□ -1.06
CASC19-260ENST00000641828 CLUAP1Q96AJ1 413 aa8.43□□□□□ -1.06
CASC19-260ENST00000641828 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
CASC19-260ENST00000641828 ANO8Q9HCE9 1232 aaPredicted RBP8.43□□□□□ -1.06
CASC19-260ENST00000641828 NPDC1Q9NQX5 325 aaPredicted RBP8.43□□□□□ -1.06
CASC19-260ENST00000641828 ABCC10Q5T3U5 1492 aa8.43□□□□□ -1.06
CASC19-260ENST00000641828 RAD54L2Q9Y4B4 1467 aa8.43□□□□□ -1.06
CASC19-260ENST00000641828 HAX1O00165 279 aa8.42□□□□□ -1.06
CASC19-260ENST00000641828 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
CASC19-260ENST00000641828 WRNQ14191 1432 aaPredicted RBP eCLIP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms