RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 FOSBP53539 338 aa13.5□□□□□ -0.25
CASC19-240ENST00000641578 UPF1Q92900 1129 aaKnown RBP eCLIP13.5□□□□□ -0.25
CASC19-240ENST00000641578 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
CASC19-240ENST00000641578 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
CASC19-240ENST00000641578 WIZO95785 1651 aa13.46□□□□□ -0.26
CASC19-240ENST00000641578 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CASC19-240ENST00000641578 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
CASC19-240ENST00000641578 ITGBL1O95965 494 aaPredicted RBP13.42□□□□□ -0.26
CASC19-240ENST00000641578 NBPF3Q9H094 633 aa13.42□□□□□ -0.26
CASC19-240ENST00000641578 Q6ZNB5 142 aa13.41□□□□□ -0.26
CASC19-240ENST00000641578 JPH4Q96JJ6 628 aa13.4□□□□□ -0.26
CASC19-240ENST00000641578 ADAM33Q9BZ11 813 aa13.4□□□□□ -0.26
CASC19-240ENST00000641578 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
CASC19-240ENST00000641578 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
CASC19-240ENST00000641578 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
CASC19-240ENST00000641578 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
CASC19-240ENST00000641578 PPP1R15BQ5SWA1 713 aa13.35□□□□□ -0.27
CASC19-240ENST00000641578 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
CASC19-240ENST00000641578 MRC2Q9UBG0 1479 aa13.33□□□□□ -0.28
CASC19-240ENST00000641578 EVI5O60447 810 aa13.32□□□□□ -0.28
CASC19-240ENST00000641578 ANKK1Q8NFD2 765 aa13.31□□□□□ -0.28
CASC19-240ENST00000641578 CADPSQ9ULU8 1353 aa13.31□□□□□ -0.28
CASC19-240ENST00000641578 RABGEF1Q9UJ41 708 aa13.3□□□□□ -0.28
CASC19-240ENST00000641578 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
CASC19-240ENST00000641578 BCAMP50895 628 aa13.29□□□□□ -0.28
CASC19-240ENST00000641578 PROX2Q3B8N5 592 aa13.28□□□□□ -0.28
CASC19-240ENST00000641578 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
CASC19-240ENST00000641578 LCE2BO14633 110 aa13.26□□□□□ -0.29
CASC19-240ENST00000641578 WDR62O43379 1518 aa13.26□□□□□ -0.29
CASC19-240ENST00000641578 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
CASC19-240ENST00000641578 SOWAHBA6NEL2 793 aa13.25□□□□□ -0.29
CASC19-240ENST00000641578 COL9A1P20849 921 aa13.24□□□□□ -0.29
CASC19-240ENST00000641578 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
CASC19-240ENST00000641578 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
CASC19-240ENST00000641578 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
CASC19-240ENST00000641578 KCNC4Q03721 635 aa13.21□□□□□ -0.29
CASC19-240ENST00000641578 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
CASC19-240ENST00000641578 WBP1LQ9NX94 342 aa13.21□□□□□ -0.29
CASC19-240ENST00000641578 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.3
CASC19-240ENST00000641578 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
CASC19-240ENST00000641578 PDE4AP27815 886 aa13.19□□□□□ -0.3
CASC19-240ENST00000641578 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
CASC19-240ENST00000641578 ZFRQ96KR1 1074 aaKnown RBP13.19□□□□□ -0.3
CASC19-240ENST00000641578 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
CASC19-240ENST00000641578 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
CASC19-240ENST00000641578 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
CASC19-240ENST00000641578 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
CASC19-240ENST00000641578 GFRA3O60609 400 aa13.12□□□□□ -0.31
CASC19-240ENST00000641578 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
CASC19-240ENST00000641578 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
CASC19-240ENST00000641578 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
CASC19-240ENST00000641578 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 FBXW7Q969H0 707 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
CASC19-240ENST00000641578 EMILIN3Q9NT22 766 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
CASC19-240ENST00000641578 ONECUT3O60422 494 aaPredicted RBP13.09□□□□□ -0.31
CASC19-240ENST00000641578 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
CASC19-240ENST00000641578 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
CASC19-240ENST00000641578 PHF14O94880 888 aa13.07□□□□□ -0.32
CASC19-240ENST00000641578 ARHGEF11O15085 1522 aa13.07□□□□□ -0.32
CASC19-240ENST00000641578 TSR3Q9UJK0 312 aaKnown RBP13.06□□□□□ -0.32
CASC19-240ENST00000641578 MFSD10Q14728 455 aa13.05□□□□□ -0.32
CASC19-240ENST00000641578 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
CASC19-240ENST00000641578 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
CASC19-240ENST00000641578 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
CASC19-240ENST00000641578 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
CASC19-240ENST00000641578 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
CASC19-240ENST00000641578 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
CASC19-240ENST00000641578 CFTRP13569 1480 aa13□□□□□ -0.33
CASC19-240ENST00000641578 NRG2O14511 850 aaPredicted RBP13□□□□□ -0.33
CASC19-240ENST00000641578 PRKD2Q9BZL6 878 aa12.99□□□□□ -0.33
CASC19-240ENST00000641578 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
CASC19-240ENST00000641578 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
CASC19-240ENST00000641578 TJAP1Q5JTD0 557 aa12.95□□□□□ -0.34
CASC19-240ENST00000641578 EPAS1Q99814 870 aa12.95□□□□□ -0.34
CASC19-240ENST00000641578 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
CASC19-240ENST00000641578 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
CASC19-240ENST00000641578 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
CASC19-240ENST00000641578 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
CASC19-240ENST00000641578 PPP4CP60510 307 aa12.9□□□□□ -0.34
CASC19-240ENST00000641578 ZNF787Q6DD87 383 aa12.9□□□□□ -0.34
CASC19-240ENST00000641578 PPP1R18Q6NYC8 613 aa12.89□□□□□ -0.35
CASC19-240ENST00000641578 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
CASC19-240ENST00000641578 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
CASC19-240ENST00000641578 PRDM2Q13029 1718 aa12.87□□□□□ -0.35
CASC19-240ENST00000641578 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
CASC19-240ENST00000641578 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
CASC19-240ENST00000641578 ZNF775Q96BV0 537 aaPredicted RBP12.85□□□□□ -0.35
CASC19-240ENST00000641578 MTRQ99707 1265 aa12.85□□□□□ -0.35
CASC19-240ENST00000641578 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
CASC19-240ENST00000641578 PACS2Q86VP3 889 aa12.83□□□□□ -0.36
CASC19-240ENST00000641578 IL21Q9HBE4 155 aa12.83□□□□□ -0.36
CASC19-240ENST00000641578 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
CASC19-240ENST00000641578 DPYSL4O14531 572 aa12.81□□□□□ -0.36
CASC19-240ENST00000641578 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
CASC19-240ENST00000641578 SAMD7Q7Z3H4 446 aa12.81□□□□□ -0.36
CASC19-240ENST00000641578 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms