RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 FOSBP53539 338 aa13.5□□□□□ -0.25
CASC19-240ENST00000641578 UPF1Q92900 1129 aaKnown RBP eCLIP13.5□□□□□ -0.25
CASC19-240ENST00000641578 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
CASC19-240ENST00000641578 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
CASC19-240ENST00000641578 WIZO95785 1651 aa13.46□□□□□ -0.26
CASC19-240ENST00000641578 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CASC19-240ENST00000641578 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
CASC19-240ENST00000641578 ITGBL1O95965 494 aaPredicted RBP13.42□□□□□ -0.26
CASC19-240ENST00000641578 NBPF3Q9H094 633 aa13.42□□□□□ -0.26
CASC19-240ENST00000641578 Q6ZNB5 142 aa13.41□□□□□ -0.26
CASC19-240ENST00000641578 JPH4Q96JJ6 628 aa13.4□□□□□ -0.26
CASC19-240ENST00000641578 ADAM33Q9BZ11 813 aa13.4□□□□□ -0.26
CASC19-240ENST00000641578 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
CASC19-240ENST00000641578 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
CASC19-240ENST00000641578 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
CASC19-240ENST00000641578 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
CASC19-240ENST00000641578 PPP1R15BQ5SWA1 713 aa13.35□□□□□ -0.27
CASC19-240ENST00000641578 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
CASC19-240ENST00000641578 MRC2Q9UBG0 1479 aa13.33□□□□□ -0.28
CASC19-240ENST00000641578 EVI5O60447 810 aa13.32□□□□□ -0.28
CASC19-240ENST00000641578 ANKK1Q8NFD2 765 aa13.31□□□□□ -0.28
CASC19-240ENST00000641578 CADPSQ9ULU8 1353 aa13.31□□□□□ -0.28
CASC19-240ENST00000641578 RABGEF1Q9UJ41 708 aa13.3□□□□□ -0.28
CASC19-240ENST00000641578 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
CASC19-240ENST00000641578 BCAMP50895 628 aa13.29□□□□□ -0.28
CASC19-240ENST00000641578 PROX2Q3B8N5 592 aa13.28□□□□□ -0.28
CASC19-240ENST00000641578 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
CASC19-240ENST00000641578 LCE2BO14633 110 aa13.26□□□□□ -0.29
CASC19-240ENST00000641578 WDR62O43379 1518 aa13.26□□□□□ -0.29
CASC19-240ENST00000641578 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
CASC19-240ENST00000641578 SOWAHBA6NEL2 793 aa13.25□□□□□ -0.29
CASC19-240ENST00000641578 COL9A1P20849 921 aa13.24□□□□□ -0.29
CASC19-240ENST00000641578 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
CASC19-240ENST00000641578 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
CASC19-240ENST00000641578 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
CASC19-240ENST00000641578 KCNC4Q03721 635 aa13.21□□□□□ -0.29
CASC19-240ENST00000641578 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
CASC19-240ENST00000641578 WBP1LQ9NX94 342 aa13.21□□□□□ -0.29
CASC19-240ENST00000641578 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.3
CASC19-240ENST00000641578 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
CASC19-240ENST00000641578 PDE4AP27815 886 aa13.19□□□□□ -0.3
CASC19-240ENST00000641578 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
CASC19-240ENST00000641578 ZFRQ96KR1 1074 aaKnown RBP13.19□□□□□ -0.3
CASC19-240ENST00000641578 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
CASC19-240ENST00000641578 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
CASC19-240ENST00000641578 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
CASC19-240ENST00000641578 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
CASC19-240ENST00000641578 GFRA3O60609 400 aa13.12□□□□□ -0.31
CASC19-240ENST00000641578 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
CASC19-240ENST00000641578 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
CASC19-240ENST00000641578 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
CASC19-240ENST00000641578 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 FBXW7Q969H0 707 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
CASC19-240ENST00000641578 EMILIN3Q9NT22 766 aa13.1□□□□□ -0.31
CASC19-240ENST00000641578 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
CASC19-240ENST00000641578 ONECUT3O60422 494 aaPredicted RBP13.09□□□□□ -0.31
CASC19-240ENST00000641578 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
CASC19-240ENST00000641578 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
CASC19-240ENST00000641578 PHF14O94880 888 aa13.07□□□□□ -0.32
CASC19-240ENST00000641578 ARHGEF11O15085 1522 aa13.07□□□□□ -0.32
CASC19-240ENST00000641578 TSR3Q9UJK0 312 aaKnown RBP13.06□□□□□ -0.32
CASC19-240ENST00000641578 MFSD10Q14728 455 aa13.05□□□□□ -0.32
CASC19-240ENST00000641578 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
CASC19-240ENST00000641578 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
CASC19-240ENST00000641578 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
CASC19-240ENST00000641578 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
CASC19-240ENST00000641578 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
CASC19-240ENST00000641578 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
CASC19-240ENST00000641578 CFTRP13569 1480 aa13□□□□□ -0.33
CASC19-240ENST00000641578 NRG2O14511 850 aaPredicted RBP13□□□□□ -0.33
CASC19-240ENST00000641578 PRKD2Q9BZL6 878 aa12.99□□□□□ -0.33
CASC19-240ENST00000641578 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
CASC19-240ENST00000641578 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
CASC19-240ENST00000641578 TJAP1Q5JTD0 557 aa12.95□□□□□ -0.34
CASC19-240ENST00000641578 EPAS1Q99814 870 aa12.95□□□□□ -0.34
CASC19-240ENST00000641578 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
CASC19-240ENST00000641578 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
CASC19-240ENST00000641578 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
CASC19-240ENST00000641578 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
CASC19-240ENST00000641578 PPP4CP60510 307 aa12.9□□□□□ -0.34
CASC19-240ENST00000641578 ZNF787Q6DD87 383 aa12.9□□□□□ -0.34
CASC19-240ENST00000641578 PPP1R18Q6NYC8 613 aa12.89□□□□□ -0.35
CASC19-240ENST00000641578 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
CASC19-240ENST00000641578 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
CASC19-240ENST00000641578 PRDM2Q13029 1718 aa12.87□□□□□ -0.35
CASC19-240ENST00000641578 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
CASC19-240ENST00000641578 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
CASC19-240ENST00000641578 ZNF775Q96BV0 537 aaPredicted RBP12.85□□□□□ -0.35
CASC19-240ENST00000641578 MTRQ99707 1265 aa12.85□□□□□ -0.35
CASC19-240ENST00000641578 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
CASC19-240ENST00000641578 PACS2Q86VP3 889 aa12.83□□□□□ -0.36
CASC19-240ENST00000641578 IL21Q9HBE4 155 aa12.83□□□□□ -0.36
CASC19-240ENST00000641578 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
CASC19-240ENST00000641578 DPYSL4O14531 572 aa12.81□□□□□ -0.36
CASC19-240ENST00000641578 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
CASC19-240ENST00000641578 SAMD7Q7Z3H4 446 aa12.81□□□□□ -0.36
CASC19-240ENST00000641578 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms