RNA–Protein interactions for RNA: ENST00000640368.1

PAX6-270, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,975 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-270ENST00000640368 GOLGA6L3A6NEY3 463 aa10.6□□□□□ -0.71
PAX6-270ENST00000640368 CLUAP1Q96AJ1 413 aa10.6□□□□□ -0.71
PAX6-270ENST00000640368 TPM2P07951 284 aa10.6□□□□□ -0.71
PAX6-270ENST00000640368 AKAP17AQ02040 695 aaKnown RBP10.6□□□□□ -0.71
PAX6-270ENST00000640368 GBP4Q96PP9 640 aa10.6□□□□□ -0.71
PAX6-270ENST00000640368 TSR1Q2NL82 804 aaKnown RBP10.59□□□□□ -0.71
PAX6-270ENST00000640368 NGDNQ8NEJ9 315 aaKnown RBP10.59□□□□□ -0.71
PAX6-270ENST00000640368 H3BQV1 296 aa10.59□□□□□ -0.71
PAX6-270ENST00000640368 IFFO2Q5TF58 517 aa10.59□□□□□ -0.71
PAX6-270ENST00000640368 SKIDA1Q1XH10 827 aa10.59□□□□□ -0.71
PAX6-270ENST00000640368 MTMR7Q9Y216 660 aa10.59□□□□□ -0.71
PAX6-270ENST00000640368 NECTIN2Q92692 538 aa10.59□□□□□ -0.71
PAX6-270ENST00000640368 IPO8O15397 1037 aaKnown RBP10.59□□□□□ -0.71
PAX6-270ENST00000640368 SYAP1Q96A49 352 aaPredicted RBP10.59□□□□□ -0.71
PAX6-270ENST00000640368 PPP1R1BQ9UD71 204 aaPredicted RBP10.59□□□□□ -0.71
PAX6-270ENST00000640368 ZNF592Q92610 1267 aa10.58□□□□□ -0.72
PAX6-270ENST00000640368 AMPHP49418 695 aa10.58□□□□□ -0.72
PAX6-270ENST00000640368 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
PAX6-270ENST00000640368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.72
PAX6-270ENST00000640368 CCDC43Q96MW1 224 aaKnown RBP10.58□□□□□ -0.72
PAX6-270ENST00000640368 AMOTL1Q8IY63 956 aa10.57□□□□□ -0.72
PAX6-270ENST00000640368 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
PAX6-270ENST00000640368 EIF4G1Q04637 1599 aaKnown RBP10.57□□□□□ -0.72
PAX6-270ENST00000640368 RSPH6AQ9H0K4 717 aa10.57□□□□□ -0.72
PAX6-270ENST00000640368 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
PAX6-270ENST00000640368 VPS37DQ86XT2 251 aa10.56□□□□□ -0.72
PAX6-270ENST00000640368 MCTP1Q6DN14 999 aa10.56□□□□□ -0.72
PAX6-270ENST00000640368 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
PAX6-270ENST00000640368 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
PAX6-270ENST00000640368 RILPL2Q969X0 211 aa10.56□□□□□ -0.72
PAX6-270ENST00000640368 KIF16BQ96L93 1317 aa10.56□□□□□ -0.72
PAX6-270ENST00000640368 FYB1O15117 783 aa10.55□□□□□ -0.72
PAX6-270ENST00000640368 TMEM132AQ24JP5 1023 aa10.55□□□□□ -0.72
PAX6-270ENST00000640368 CSPP1Q1MSJ5 1256 aa10.55□□□□□ -0.72
PAX6-270ENST00000640368 RRP12Q5JTH9 1297 aaKnown RBP10.55□□□□□ -0.72
PAX6-270ENST00000640368 FAM184AQ8NB25 1140 aa10.54□□□□□ -0.72
PAX6-270ENST00000640368 CCER2I3L3R5 266 aa10.54□□□□□ -0.72
PAX6-270ENST00000640368 APPP05067 770 aa10.54□□□□□ -0.72
PAX6-270ENST00000640368 IBSPP21815 317 aaPredicted RBP10.54□□□□□ -0.72
PAX6-270ENST00000640368 ZFYVE27Q5T4F4 411 aa10.54□□□□□ -0.72
PAX6-270ENST00000640368 SMC4Q9NTJ3 1288 aa10.54□□□□□ -0.72
PAX6-270ENST00000640368 ELL2O00472 640 aaPredicted RBP10.54□□□□□ -0.72
PAX6-270ENST00000640368 ODF2Q5BJF6 829 aa10.53□□□□□ -0.72
PAX6-270ENST00000640368 CALD1Q05682 793 aaKnown RBP10.53□□□□□ -0.72
PAX6-270ENST00000640368 SYNE3Q6ZMZ3 975 aa10.53□□□□□ -0.72
PAX6-270ENST00000640368 EID1Q9Y6B2 187 aa10.53□□□□□ -0.72
PAX6-270ENST00000640368 USP35Q9P2H5 1018 aa10.53□□□□□ -0.72
PAX6-270ENST00000640368 PODXL2Q9NZ53 605 aa10.53□□□□□ -0.72
PAX6-270ENST00000640368 RRP7AQ9Y3A4 280 aaKnown RBP10.53□□□□□ -0.72
PAX6-270ENST00000640368 NAP1L1P55209 391 aaKnown RBP10.52□□□□□ -0.72
PAX6-270ENST00000640368 CT47A1Q5JQC4 288 aaPredicted RBP10.52□□□□□ -0.73
PAX6-270ENST00000640368 CEP162Q5TB80 1403 aa10.52□□□□□ -0.73
PAX6-270ENST00000640368 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.73
PAX6-270ENST00000640368 RWDD1Q9H446 243 aaPredicted RBP10.51□□□□□ -0.73
PAX6-270ENST00000640368 CLIP1P30622 1438 aa10.51□□□□□ -0.73
PAX6-270ENST00000640368 CCAR1Q8IX12 1150 aaKnown RBP10.51□□□□□ -0.73
PAX6-270ENST00000640368 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
PAX6-270ENST00000640368 GOLGA3Q08378 1498 aa10.51□□□□□ -0.73
PAX6-270ENST00000640368 CCDC70Q6NSX1 233 aa10.51□□□□□ -0.73
PAX6-270ENST00000640368 TPM1P09493 284 aa10.5□□□□□ -0.73
PAX6-270ENST00000640368 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.5□□□□□ -0.73
PAX6-270ENST00000640368 R3HCC1Q9Y3T6 440 aaKnown RBP10.5□□□□□ -0.73
PAX6-270ENST00000640368 BCL2L13Q9BXK5 485 aa10.5□□□□□ -0.73
PAX6-270ENST00000640368 FAM13BQ9NYF5 915 aa10.5□□□□□ -0.73
PAX6-270ENST00000640368 PPM1FP49593 454 aaPredicted RBP10.5□□□□□ -0.73
PAX6-270ENST00000640368 HMMRO75330 724 aa10.49□□□□□ -0.73
PAX6-270ENST00000640368 CCNB3Q8WWL7 1395 aa10.49□□□□□ -0.73
PAX6-270ENST00000640368 EIF2S2P20042 333 aaKnown RBP10.49□□□□□ -0.73
PAX6-270ENST00000640368 TCERG1O14776 1098 aaKnown RBP10.49□□□□□ -0.73
PAX6-270ENST00000640368 HSP90AB2PQ58FF8 381 aa10.49□□□□□ -0.73
PAX6-270ENST00000640368 GOLGA6L19H0YKK7 550 aa10.49□□□□□ -0.73
PAX6-270ENST00000640368 TRIM29Q14134 588 aa10.49□□□□□ -0.73
PAX6-270ENST00000640368 RBM33Q96EV2 1170 aaKnown RBP10.49□□□□□ -0.73
PAX6-270ENST00000640368 IKQ13123 557 aaPredicted RBP10.48□□□□□ -0.73
PAX6-270ENST00000640368 NFXL1Q6ZNB6 911 aa10.48□□□□□ -0.73
PAX6-270ENST00000640368 TTLL5Q6EMB2 1281 aa10.48□□□□□ -0.73
PAX6-270ENST00000640368 IPO9Q96P70 1041 aaKnown RBP10.47□□□□□ -0.73
PAX6-270ENST00000640368 RB1CC1Q8TDY2 1594 aa10.47□□□□□ -0.73
PAX6-270ENST00000640368 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
PAX6-270ENST00000640368 WWC2Q6AWC2 1192 aa10.47□□□□□ -0.73
PAX6-270ENST00000640368 KTN1Q86UP2 1357 aaKnown RBP10.46□□□□□ -0.73
PAX6-270ENST00000640368 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
PAX6-270ENST00000640368 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.74
PAX6-270ENST00000640368 CCDC47Q96A33 483 aaKnown RBP10.46□□□□□ -0.74
PAX6-270ENST00000640368 PLCD4Q9BRC7 762 aa10.46□□□□□ -0.74
PAX6-270ENST00000640368 FAM177BA6PVY3 158 aa10.46□□□□□ -0.74
PAX6-270ENST00000640368 BECN2A8MW95 431 aa10.46□□□□□ -0.74
PAX6-270ENST00000640368 ROCK2O75116 1388 aaKnown RBP10.45□□□□□ -0.74
PAX6-270ENST00000640368 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
PAX6-270ENST00000640368 PHF14O94880 888 aa10.45□□□□□ -0.74
PAX6-270ENST00000640368 PMFBP1Q8TBY8 1022 aa10.45□□□□□ -0.74
PAX6-270ENST00000640368 CHMP4CQ96CF2 233 aa10.45□□□□□ -0.74
PAX6-270ENST00000640368 KIF3AQ9Y496 699 aa10.45□□□□□ -0.74
PAX6-270ENST00000640368 EPS15P42566 896 aa10.45□□□□□ -0.74
PAX6-270ENST00000640368 ANO2Q9NQ90 1003 aa10.44□□□□□ -0.74
PAX6-270ENST00000640368 CCDC97Q96F63 343 aaPredicted RBP10.44□□□□□ -0.74
PAX6-270ENST00000640368 HDAC5Q9UQL6 1122 aa10.44□□□□□ -0.74
PAX6-270ENST00000640368 CEP164Q9UPV0 1460 aa10.44□□□□□ -0.74
PAX6-270ENST00000640368 PLIN1O60240 522 aa10.44□□□□□ -0.74
PAX6-270ENST00000640368 ST18O60284 1047 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms